Factsheet for Zm00001d030091_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

golgi 4
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91872	Sorghum	endoplasmic reticulum, golgi	94.21	94.21
Os10t0577000-02	Rice	endoplasmic reticulum, golgi	82.62	82.62
TraesCS1D01G198400.1	Wheat	endoplasmic reticulum, golgi	78.96	79.69
TraesCS1A01G194800.1	Wheat	golgi	78.66	79.38
TraesCS1B01G209600.1	Wheat	endoplasmic reticulum, extracellular	78.35	79.08
HORVU6Hr1G058250.1	Barley	cytosol	68.29	68.71
GSMUA_Achr4P27310_001	Banana	endoplasmic reticulum, golgi	61.89	63.24
GSMUA_Achr5P03470_001	Banana	extracellular	28.35	61.59
AT1G65020.1	Thale cress	extracellular, vacuole	50.91	52.35
KRH27693	Soybean	endoplasmic reticulum, extracellular	51.22	52.17
CDY03064	Canola	endoplasmic reticulum	11.89	52.0
KRH77782	Soybean	endoplasmic reticulum	50.91	51.86
Bra022499.1-P	Field mustard	endoplasmic reticulum, vacuole	50.0	51.41
Bra004108.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	49.39	50.78
PGSC0003DMT400008203	Potato	mitochondrion	49.39	50.78
Solyc03g097180.2.1	Tomato	extracellular	49.09	50.47
VIT_16s0039g01660.t01	Wine grape	endoplasmic reticulum, extracellular	48.48	49.38

Protein Annotations

EnsemblPlants:Zm00001d030091_P001	EnsemblPlants:Zm00001d030091_T001	EnsemblPlantsGene:Zm00001d030091	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0016020	InterPro:IPR011528	InterPro:NERD
PANTHER:PTHR35287	PFAM:PF08378	PFscan:PS50965	ProteinID:ONM00146.1	SEG:seg	UniParc:UPI000221C07C
UniProt:A0A1D6K9H8	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1:-:105035216..105041237

Molecular Weight (calculated)

37043.7 Da

IEP (calculated)

9.567

GRAVY (calculated)

-0.252

Length

328 amino acids

Sequence
(BLAST)

001: MWVEILCGLV VYKIIQRVFF AGGDDASYLA DLDSSHSDLC FAVASRLEKL YAGRCFVGLR IPDPDAGERQ HIDVVLVTKR EVMVVAIKNL SGFVEADKDG
101: NWSCPTDKKH KHEIFPNPVL EVNRLAANLQ SYLEQRGAKL PDGHIIGRVV LPNPNCRPSY TISTQPEVML YDQWKDLKTD SKTGLSAWIK GAFTGSRSDM
201: QDSVLQNLHF ILSSSPMWDR LELKGDKNVL GEFIEFKGRH EDVQLLKILK RSKVSRFIIQ KSTLFGGFGR SRVQILYSPR DYRAEGTSSS ELKEISVKQY
301: TEIVFQPLRS KKARKFKLSN VVSVTLSA

Best Arabidopsis Sequence Match ( AT1G65020.1 )
(BLAST)

001: MWIEIICGLV IYKLVRRFFY DDEFSDVETS DSTALFSVAH RLEKLYGGKA YVGLRIPDAD TASRQDIDVV LVTKGDVVVI SVKNLSGIVT VTSDGSWVCE
101: GGKHHTTETF PDPLAEVKKQ ASVLESYLEQ RGVTLLEGNV SCKVVIPNPS FRTIHAFPSE VITYEDWQQL KPVSKSKISG WVKGAFSTGK EMQESSHQKL
201: NFILGTAPTW DRVELKSSKI VLGEFLEFKG KQEDTLALRN IKRSKVDRVS IQKTSMFGLA PSRLQVLYSY RDYRSEGSSG AESKEVTVRS STEVLFQPRD
301: STKMKKFKLS SLVSISLSA

Arabidopsis Description

At1g65020 [Source:UniProtKB/TrEMBL;Acc:Q5XF12]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.