Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27693 | Soybean | endoplasmic reticulum, extracellular | 68.01 | 68.01 |
| KRH77782 | Soybean | endoplasmic reticulum | 67.7 | 67.7 |
| AT1G65020.1 | Thale cress | extracellular, vacuole | 65.84 | 66.46 |
| PGSC0003DMT400008203 | Potato | mitochondrion | 63.04 | 63.64 |
| CDY39295 | Canola | endoplasmic reticulum | 62.73 | 63.12 |
| Bra004108.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 62.42 | 63.01 |
| Solyc03g097180.2.1 | Tomato | extracellular | 62.42 | 63.01 |
| CDY07441 | Canola | cytosol | 62.42 | 63.01 |
| Bra022499.1-P | Field mustard | endoplasmic reticulum, vacuole | 60.56 | 61.13 |
| CDX91528 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 54.66 | 59.46 |
| CDY16384 | Canola | endoplasmic reticulum, extracellular | 60.56 | 59.27 |
| GSMUA_Achr4P27310_001 | Banana | endoplasmic reticulum, golgi | 51.86 | 52.02 |
| GSMUA_Achr5P03470_001 | Banana | extracellular | 23.91 | 50.99 |
| EER91872 | Sorghum | endoplasmic reticulum, golgi | 50.31 | 49.39 |
| GSMUA_Achr5P03480_001 | Banana | nucleus | 31.06 | 49.26 |
| TraesCS1A01G194800.1 | Wheat | golgi | 49.07 | 48.62 |
| TraesCS1D01G198400.1 | Wheat | endoplasmic reticulum, golgi | 49.07 | 48.62 |
| Zm00001d030091_P001 | Maize | extracellular, golgi | 49.38 | 48.48 |
| TraesCS1B01G209600.1 | Wheat | endoplasmic reticulum, extracellular | 48.45 | 48.0 |
| Os10t0577000-02 | Rice | endoplasmic reticulum, golgi | 47.2 | 46.34 |
| CDX91527 | Canola | endoplasmic reticulum, vacuole | 6.83 | 44.0 |
| HORVU6Hr1G058250.1 | Barley | cytosol | 44.1 | 43.56 |
Protein Annotations
| EntrezGene:100263053 | wikigene:100263053 | MapMan:35.2 | ProteinID:CBI26485 | ProteinID:CBI26485.3 | UniProt:D7T7L4 |
| EMBL:FN595750 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005886 | GO:GO:0016020 | InterPro:IPR011528 | EntrezGene:LOC100263053 | wikigene:LOC100263053 | InterPro:NERD |
| PFAM:PF08378 | PFscan:PS50965 | PANTHER:PTHR35287 | TIGR:TC64287 | UniParc:UPI00015C8DFD | ArrayExpress:VIT_16s0039g01660 |
| EnsemblPlantsGene:VIT_16s0039g01660 | EnsemblPlants:VIT_16s0039g01660.t01 | unigene:Vvi.2149 | RefSeq:XP_002272266 | RefSeq:XP_002272266.1 | : |
Description
No Description!
Coordinates
chr16:+:1267779..1282196
Molecular Weight (calculated)
36211.5 Da
IEP (calculated)
9.200
GRAVY (calculated)
-0.273
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MWAELLCGLV IYRVLRYFFS DDDVLEVENT DSGALFSVAN KIEKLYDGKV YAGLRIPDAD TGSRENIDMV LVTKGGAVVI SVKNFSGIIS IDADGSWVCN
101: AGDRHKAERH PDPVAEAKKR VSILESYLEQ RGVALPEGYV SCQVILANPK YCSIHSNHIP SEVITYDQWT QLKPEAKSLF SGWFKGGLRA GKKEMQESIH
201: QRLNFVLSTA PMWDRLELKG NKYVLGEFLE FKGKHDDTQA LRNIKRSKVS RLIIQKFSML GFAPSKVQLL YSPRDYRSDG ASASEWKELT IRSSTEVLFQ
301: PQNSTKVRKF KLSSILSMSL SA
101: AGDRHKAERH PDPVAEAKKR VSILESYLEQ RGVALPEGYV SCQVILANPK YCSIHSNHIP SEVITYDQWT QLKPEAKSLF SGWFKGGLRA GKKEMQESIH
201: QRLNFVLSTA PMWDRLELKG NKYVLGEFLE FKGKHDDTQA LRNIKRSKVS RLIIQKFSML GFAPSKVQLL YSPRDYRSDG ASASEWKELT IRSSTEVLFQ
301: PQNSTKVRKF KLSSILSMSL SA
001: MWIEIICGLV IYKLVRRFFY DDEFSDVETS DSTALFSVAH RLEKLYGGKA YVGLRIPDAD TASRQDIDVV LVTKGDVVVI SVKNLSGIVT VTSDGSWVCE
101: GGKHHTTETF PDPLAEVKKQ ASVLESYLEQ RGVTLLEGNV SCKVVIPNPS FRTIHAFPSE VITYEDWQQL KPVSKSKISG WVKGAFSTGK EMQESSHQKL
201: NFILGTAPTW DRVELKSSKI VLGEFLEFKG KQEDTLALRN IKRSKVDRVS IQKTSMFGLA PSRLQVLYSY RDYRSEGSSG AESKEVTVRS STEVLFQPRD
301: STKMKKFKLS SLVSISLSA
101: GGKHHTTETF PDPLAEVKKQ ASVLESYLEQ RGVTLLEGNV SCKVVIPNPS FRTIHAFPSE VITYEDWQQL KPVSKSKISG WVKGAFSTGK EMQESSHQKL
201: NFILGTAPTW DRVELKSSKI VLGEFLEFKG KQEDTLALRN IKRSKVDRVS IQKTSMFGLA PSRLQVLYSY RDYRSEGSSG AESKEVTVRS STEVLFQPRD
301: STKMKKFKLS SLVSISLSA
Arabidopsis Description
At1g65020 [Source:UniProtKB/TrEMBL;Acc:Q5XF12]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.