Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50707 | Soybean | cytosol | 31.61 | 72.37 |
| KRH36957 | Soybean | cytosol | 58.62 | 53.97 |
| KRH11921 | Soybean | cytosol | 60.34 | 53.85 |
| VIT_05s0077g00740.t01 | Wine grape | cytosol | 56.32 | 52.13 |
| GSMUA_Achr2P02060_001 | Banana | plastid | 54.02 | 48.96 |
| EES16167 | Sorghum | cytosol | 53.45 | 48.69 |
| Zm00001d030627_P002 | Maize | cytosol | 52.3 | 48.15 |
| Solyc05g053390.2.1 | Tomato | cytosol | 52.87 | 47.92 |
| PGSC0003DMT400069969 | Potato | cytosol, plastid | 52.87 | 47.92 |
| Zm00001d041597_P001 | Maize | cytosol, extracellular | 51.72 | 47.87 |
| AT5G49510.1 | Thale cress | cytosol | 51.72 | 46.15 |
| Os12t0562900-01 | Rice | plastid | 51.15 | 45.41 |
| CDY49601 | Canola | cytosol | 50.57 | 44.9 |
| Bra036139.1-P | Field mustard | cytosol | 50.57 | 44.9 |
| CDX86232 | Canola | cytosol | 50.0 | 44.62 |
| CDX85412 | Canola | cytosol | 50.0 | 44.62 |
| Bra010033.1-P | Field mustard | cytosol | 50.0 | 44.62 |
| TraesCS5A01G086100.1 | Wheat | cytosol | 48.85 | 43.59 |
| TraesCS5B01G092100.2 | Wheat | golgi | 48.85 | 43.59 |
| TraesCS5D01G099500.1 | Wheat | cytosol | 48.85 | 43.59 |
| HORVU5Hr1G022470.1 | Barley | cytosol | 49.43 | 41.75 |
| CDY00028 | Canola | cytosol | 50.57 | 34.38 |
Protein Annotations
| MapMan:20.3.2.3 | EMBL:ACUP02010303 | EnsemblPlantsGene:GLYMA_17G035300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005844 | GO:GO:0006457 |
| GO:GO:0007017 | GO:GO:0007021 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015631 | GO:GO:0016043 |
| GO:GO:0016272 | UniProt:K7MJS2 | EnsemblPlants:KRH02379 | ProteinID:KRH02379 | ProteinID:KRH02379.1 | PFAM:PF02996 |
| InterPro:PFD3 | PANTHER:PTHR12409 | InterPro:Prefoldin_subunit_alpha | SUPFAM:SSF46579 | UniParc:UPI0002949AE5 | : |
Description
hypothetical protein
Coordinates
chr17:+:2578269..2582338
Molecular Weight (calculated)
19677.3 Da
IEP (calculated)
4.659
GRAVY (calculated)
-0.274
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKTVGTGYG VAEQRGIPGV QSYLTQSYLD VNNFALPFLQ QNEYKWVGRE QDFSFAKIPD IEKCLDVVAT LQAKRGYWCS EEKYSQACVE ETDSVCLWLG
101: PNVMSEYSLE EAIDLLQNQD NAKASLEVLA TDIQFLRDQV TLTPNVHRRK IIQAGAITAQ KLANKNSYLL FYTC
101: PNVMSEYSLE EAIDLLQNQD NAKASLEVLA TDIQFLRDQV TLTPNVHRRK IIQAGAITAQ KLANKNSYLL FYTC
001: MSSSSPSGSG SDLTERRGIP AAKFIQDVET YLSQSGLDPN SALAFHQERL QQYKVVEMKL LAQQRDLQAK IPDIEKCLEV VATLEAKKGT GEALLADFEV
101: SEGIYSRACI EDTDSVCLWL GANVMLEYSC EEASALLKNN LENAKASLEV LVADLQFLRD QVTVTQVTIA RVYNWDVHQR RVKQVTPTAI AVADS
101: SEGIYSRACI EDTDSVCLWL GANVMLEYSC EEASALLKNN LENAKASLEV LVADLQFLRD QVTVTQVTIA RVYNWDVHQR RVKQVTPTAI AVADS
Arabidopsis Description
PFD3Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P57741]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.