Factsheet for HORVU5Hr1G022470.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
TargetP:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G099500.1	Wheat	cytosol	92.23	97.44
TraesCS5B01G092100.2	Wheat	golgi	92.23	97.44
TraesCS5A01G086100.1	Wheat	cytosol	92.23	97.44
EES16167	Sorghum	cytosol	80.58	86.91
Os12t0562900-01	Rice	plastid	82.52	86.73
Zm00001d041597_P001	Maize	cytosol, extracellular	78.64	86.17
Zm00001d030627_P002	Maize	cytosol	78.64	85.71
GSMUA_Achr2P02060_001	Banana	plastid	71.36	76.56
VIT_05s0077g00740.t01	Wine grape	cytosol	69.42	76.06
KRH36957	Soybean	cytosol	68.93	75.13
KRH11921	Soybean	cytosol	69.42	73.33
Solyc05g053390.2.1	Tomato	cytosol	67.96	72.92
PGSC0003DMT400069969	Potato	cytosol, plastid	67.48	72.4
AT5G49510.1	Thale cress	cytosol	67.96	71.79
KRH50707	Soybean	cytosol	26.21	71.05
Bra036139.1-P	Field mustard	cytosol	66.99	70.41
CDY49601	Canola	cytosol	66.5	69.9
CDX86232	Canola	cytosol	65.53	69.23
CDX85412	Canola	cytosol	65.53	69.23
Bra010033.1-P	Field mustard	cytosol	65.53	69.23
CDY00028	Canola	cytosol	66.5	53.52
KRH02379	Soybean	cytosol	41.75	49.43

Protein Annotations

Gene3D:1.10.287.370	MapMan:20.3.2.3	UniProt:A0A287QM05	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0016272
EnsemblPlantsGene:HORVU5Hr1G022470	EnsemblPlants:HORVU5Hr1G022470.1	InterPro:IPR009053	PFAM:PF02996	InterPro:PFD3	PIRSF:PIRSF016396
PANTHER:PTHR12409	InterPro:Prefoldin	InterPro:Prefoldin_subunit_alpha	SUPFAM:SSF46579	SignalP:SignalP-noTM	UniParc:UPI000B47FC77
SEG:seg	:	:	:	:	:

Description

Prefoldin subunit 3 [Source:UniProtKB/TrEMBL;Acc:A0A287QM05]

Coordinates

chrchr5H:-:113581603..113587081

Molecular Weight (calculated)

22716.3 Da

IEP (calculated)

4.929

GRAVY (calculated)

-0.074

Length

206 amino acids

Sequence
(BLAST)

001: SPLSLSLSLS LMAAATSSSA VAVSTPQGVA ERRGIPAASF VEDVETYLRQ AGLEVNSALA FLQERLQQYK MVEMKLLAQQ RELQAKIPDI EKCLDIVATL
101: KAKKALGEAL ISDFELSEGI YSRAKIEDSD SVCLWLGANV MLEYSCDEAN ELLKSNLDNA RASLEVLVGD LHFLRDQQTI TQVTIARIFN WDVHQRRSKQ
201: PAMKGT

Best Arabidopsis Sequence Match ( AT5G49510.1 )
(BLAST)

001: MSSSSPSGSG SDLTERRGIP AAKFIQDVET YLSQSGLDPN SALAFHQERL QQYKVVEMKL LAQQRDLQAK IPDIEKCLEV VATLEAKKGT GEALLADFEV
101: SEGIYSRACI EDTDSVCLWL GANVMLEYSC EEASALLKNN LENAKASLEV LVADLQFLRD QVTVTQVTIA RVYNWDVHQR RVKQVTPTAI AVADS

Arabidopsis Description

PFD3Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P57741]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.