Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85412 | Canola | cytosol | 93.33 | 93.33 |
| CDX86232 | Canola | cytosol | 93.33 | 93.33 |
| Bra010033.1-P | Field mustard | cytosol | 93.33 | 93.33 |
| Bra036139.1-P | Field mustard | cytosol | 92.82 | 92.35 |
| CDY49601 | Canola | cytosol | 92.82 | 92.35 |
| VIT_05s0077g00740.t01 | Wine grape | cytosol | 81.54 | 84.57 |
| GSMUA_Achr2P02060_001 | Banana | plastid | 78.46 | 79.69 |
| KRH36957 | Soybean | cytosol | 76.92 | 79.37 |
| Zm00001d041597_P001 | Maize | cytosol, extracellular | 75.38 | 78.19 |
| Solyc05g053390.2.1 | Tomato | cytosol | 76.92 | 78.12 |
| KRH11921 | Soybean | cytosol | 77.95 | 77.95 |
| KRH50707 | Soybean | cytosol | 30.26 | 77.63 |
| PGSC0003DMT400069969 | Potato | cytosol, plastid | 76.41 | 77.6 |
| Os12t0562900-01 | Rice | plastid | 77.95 | 77.55 |
| EES16167 | Sorghum | cytosol | 75.9 | 77.49 |
| Zm00001d030627_P002 | Maize | cytosol | 74.36 | 76.72 |
| TraesCS5A01G086100.1 | Wheat | cytosol | 72.31 | 72.31 |
| TraesCS5B01G092100.2 | Wheat | golgi | 72.31 | 72.31 |
| TraesCS5D01G099500.1 | Wheat | cytosol | 72.31 | 72.31 |
| CDY00028 | Canola | cytosol | 92.82 | 70.7 |
| HORVU5Hr1G022470.1 | Barley | cytosol | 71.79 | 67.96 |
| KRH02379 | Soybean | cytosol | 46.15 | 51.72 |
Protein Annotations
| Gene3D:1.10.287.370 | MapMan:20.3.2.3 | EntrezGene:835011 | ProteinID:AED95822.1 | ProteinID:AED95823.1 | EMBL:AF370354 |
| EMBL:AK317106 | ArrayExpress:AT5G49510 | EnsemblPlantsGene:AT5G49510 | RefSeq:AT5G49510 | TAIR:AT5G49510 | RefSeq:AT5G49510-TAIR-G |
| EnsemblPlants:AT5G49510.1 | TAIR:AT5G49510.1 | EMBL:AY059071 | UniProt:B9DGC8 | ProteinID:BAB10764.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005844 | GO:GO:0006457 | GO:GO:0007017 | GO:GO:0007021 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015631 | GO:GO:0016043 | GO:GO:0016272 | InterPro:IPR009053 |
| RefSeq:NP_001032045.1 | RefSeq:NP_199762.1 | UniProt:P57741 | PFAM:PF02996 | InterPro:PFD3 | Symbol:PFD3 |
| PIRSF:PIRSF016396 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR12409 | InterPro:Prefoldin | InterPro:Prefoldin_subunit_alpha | SUPFAM:SSF46579 |
| UniParc:UPI00000016EC | SEG:seg | : | : | : | : |
Description
PFD3Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P57741]
Coordinates
chr5:+:20080600..20083042
Molecular Weight (calculated)
21466.5 Da
IEP (calculated)
4.505
GRAVY (calculated)
-0.157
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSPSGSG SDLTERRGIP AAKFIQDVET YLSQSGLDPN SALAFHQERL QQYKVVEMKL LAQQRDLQAK IPDIEKCLEV VATLEAKKGT GEALLADFEV
101: SEGIYSRACI EDTDSVCLWL GANVMLEYSC EEASALLKNN LENAKASLEV LVADLQFLRD QVTVTQVTIA RVYNWDVHQR RVKQVTPTAI AVADS
101: SEGIYSRACI EDTDSVCLWL GANVMLEYSC EEASALLKNN LENAKASLEV LVADLQFLRD QVTVTQVTIA RVYNWDVHQR RVKQVTPTAI AVADS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.