Factsheet for Bra036139.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49601	Canola	cytosol	98.47	98.47
Bra010033.1-P	Field mustard	cytosol	93.37	93.85
AT5G49510.1	Thale cress	cytosol	92.35	92.82
VIT_05s0077g00740.t01	Wine grape	cytosol	78.57	81.91
KRH36957	Soybean	cytosol	75.0	77.78
KRH50707	Soybean	cytosol	29.59	76.32
CDY00028	Canola	cytosol	98.98	75.78
GSMUA_Achr2P02060_001	Banana	plastid	73.98	75.52
Solyc05g053390.2.1	Tomato	cytosol	73.47	75.0
EES16167	Sorghum	cytosol	72.96	74.87
Zm00001d041597_P001	Maize	cytosol, extracellular	71.43	74.47
KRH11921	Soybean	cytosol	73.98	74.36
Os12t0562900-01	Rice	plastid	73.98	73.98
PGSC0003DMT400069969	Potato	cytosol, plastid	72.45	73.96
Zm00001d030627_P002	Maize	cytosol	70.92	73.55
TraesCS5A01G086100.1	Wheat	cytosol	70.92	71.28
TraesCS5B01G092100.2	Wheat	golgi	70.92	71.28
TraesCS5D01G099500.1	Wheat	cytosol	70.92	71.28
HORVU5Hr1G022470.1	Barley	cytosol	70.41	66.99
KRH02379	Soybean	cytosol	44.9	50.57

Protein Annotations

EnsemblPlants:Bra036139.1	EnsemblPlants:Bra036139.1-P	EnsemblPlantsGene:Bra036139	Gene3D:1.10.287.370	GO:GO:0005575	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0016272	InterPro:IPR009053	InterPro:PFD3	InterPro:Prefoldin
InterPro:Prefoldin_subunit_alpha	ncoils:Coil	PANTHER:PTHR12409	PFAM:PF02996	PIRSF:PIRSF016396	SEG:seg
SUPFAM:SSF46579	UniParc:UPI0002541F2F	UniProt:M4F4Y5	MapMan:20.3.2.3	:	:

Description

AT5G49510 (E=1e-094) PDF3 | PDF3 (PREFOLDIN 3); unfolded protein binding

Coordinates

chrA09:+:2541336..2543013

Molecular Weight (calculated)

21582.5 Da

IEP (calculated)

4.443

GRAVY (calculated)

-0.202

Length

196 amino acids

Sequence
(BLAST)

001: MSSSSPSGSG GDDLSERRGI PAAKFIQDVE TYLSQSGFDS NSALAFHQER LQQYKVVEMK LLAQQRDLQA KIPDIEKCLE VVATLEARKG TGESLLADFE
101: VSEGIYSRAC IEDTDSVCLW LGANVMLEYS CEEATSLLKN NLENAKASLE VLVADLQFLR DQVTVTQVTI ARIYNYDVHQ RRVKQVTPTA IAAADA

Best Arabidopsis Sequence Match ( AT5G49510.1 )
(BLAST)

001: MSSSSPSGSG SDLTERRGIP AAKFIQDVET YLSQSGLDPN SALAFHQERL QQYKVVEMKL LAQQRDLQAK IPDIEKCLEV VATLEAKKGT GEALLADFEV
101: SEGIYSRACI EDTDSVCLWL GANVMLEYSC EEASALLKNN LENAKASLEV LVADLQFLRD QVTVTQVTIA RVYNWDVHQR RVKQVTPTAI AVADS

Arabidopsis Description

PFD3Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P57741]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.