Factsheet for Zm00001d041597_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030627_P002	Maize	cytosol	95.74	95.24
EES16167	Sorghum	cytosol	96.28	94.76
Os12t0562900-01	Rice	plastid	91.49	87.76
TraesCS5D01G099500.1	Wheat	cytosol	87.23	84.1
TraesCS5B01G092100.2	Wheat	golgi	87.23	84.1
TraesCS5A01G086100.1	Wheat	cytosol	87.23	84.1
GSMUA_Achr2P02060_001	Banana	plastid	82.45	80.73
Solyc05g053390.2.1	Tomato	cytosol	80.85	79.17
HORVU5Hr1G022470.1	Barley	cytosol	86.17	78.64
VIT_05s0077g00740.t01	Wine grape	cytosol	78.19	78.19
PGSC0003DMT400069969	Potato	cytosol, plastid	79.79	78.12
AT5G49510.1	Thale cress	cytosol	78.19	75.38
KRH36957	Soybean	cytosol	75.0	74.6
KRH50707	Soybean	cytosol	29.79	73.68
KRH11921	Soybean	cytosol	75.0	72.31
CDX86232	Canola	cytosol	74.47	71.79
CDX85412	Canola	cytosol	74.47	71.79
Bra010033.1-P	Field mustard	cytosol	74.47	71.79
CDY49601	Canola	cytosol	74.47	71.43
Bra036139.1-P	Field mustard	cytosol	74.47	71.43
CDY00028	Canola	cytosol	74.47	54.69
KRH02379	Soybean	cytosol	47.87	51.72

Protein Annotations

EnsemblPlants:Zm00001d041597_P001	EnsemblPlants:Zm00001d041597_T001	EnsemblPlantsGene:Zm00001d041597	Gene3D:1.10.287.370	GO:GO:0005575	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0016272	InterPro:IPR009053	InterPro:PFD3	InterPro:Prefoldin
InterPro:Prefoldin_subunit_alpha	ncoils:Coil	PANTHER:PTHR12409	PFAM:PF02996	PIRSF:PIRSF016396	ProteinID:ONM33333.1
SUPFAM:SSF46579	UniParc:UPI00022128E2	UniProt:A0A1D6MX78	MapMan:20.3.2.3	:	:

Description

Prefoldin subunit 3

Coordinates

chr3:-:129182927..129187885

Molecular Weight (calculated)

20986.2 Da

IEP (calculated)

4.931

GRAVY (calculated)

-0.121

Length

188 amino acids

Sequence
(BLAST)

001: MAAAAASTPQ GVAERRGIPA AAFVEDVEAY LRQVGLDVNS ALAFLQERLQ QYKIVEMKLL AQQRDLQAKI PDIEKCLDIV TTLQAKKDLG EALIADFELS
101: EGIYSRAKIE DTDSVCLWLG ANVMLEYSCD EANALLKKNL ENAKASLEVL VADLHFLRDQ QTITQVTIAR VFNWDVHHRR SKQAVKET

Best Arabidopsis Sequence Match ( AT5G49510.1 )
(BLAST)

001: MSSSSPSGSG SDLTERRGIP AAKFIQDVET YLSQSGLDPN SALAFHQERL QQYKVVEMKL LAQQRDLQAK IPDIEKCLEV VATLEAKKGT GEALLADFEV
101: SEGIYSRACI EDTDSVCLWL GANVMLEYSC EEASALLKNN LENAKASLEV LVADLQFLRD QVTVTQVTIA RVYNWDVHQR RVKQVTPTAI AVADS

Arabidopsis Description

PFD3Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P57741]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.