CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041597_P001	Maize	cytosol, extracellular	94.76	96.28
Zm00001d030627_P002	Maize	cytosol	94.76	95.77
Os12t0562900-01	Rice	plastid	92.67	90.31
TraesCS5D01G099500.1	Wheat	cytosol	87.96	86.15
TraesCS5B01G092100.2	Wheat	golgi	87.96	86.15
TraesCS5A01G086100.1	Wheat	cytosol	87.96	86.15
GSMUA_Achr2P02060_001	Banana	plastid	83.25	82.81
Solyc05g053390.2.1	Tomato	cytosol	81.15	80.73
HORVU5Hr1G022470.1	Barley	cytosol	86.91	80.58
PGSC0003DMT400069969	Potato	cytosol, plastid	80.1	79.69
VIT_05s0077g00740.t01	Wine grape	cytosol	78.01	79.26
KRH36957	Soybean	cytosol	75.39	76.19
AT5G49510.1	Thale cress	cytosol	77.49	75.9
KRH50707	Soybean	cytosol	29.84	75.0
KRH11921	Soybean	cytosol	75.92	74.36
CDY49601	Canola	cytosol	74.87	72.96
Bra036139.1-P	Field mustard	cytosol	74.87	72.96
CDX86232	Canola	cytosol	73.82	72.31
CDX85412	Canola	cytosol	73.82	72.31
Bra010033.1-P	Field mustard	cytosol	73.82	72.31
CDY00028	Canola	cytosol	74.87	55.86
KRH02379	Soybean	cytosol	48.69	53.45

Protein Annotations

Gene3D:1.10.287.370	MapMan:20.3.2.3	EntrezGene:8068076	UniProt:C5YPT7	ncoils:Coil	EnsemblPlants:EES16167
ProteinID:EES16167	ProteinID:EES16167.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005844	GO:GO:0006457
GO:GO:0007017	GO:GO:0007021	GO:GO:0008150	GO:GO:0009987	GO:GO:0015631	GO:GO:0016043
GO:GO:0016272	InterPro:IPR009053	PFAM:PF02996	InterPro:PFD3	PIRSF:PIRSF016396	PANTHER:PTHR12409
InterPro:Prefoldin	InterPro:Prefoldin_subunit_alpha	EnsemblPlantsGene:SORBI_3008G130400	SUPFAM:SSF46579	unigene:Sbi.15193	UniParc:UPI0001A88580
RefSeq:XP_002442329.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:55625922..55632578

Molecular Weight (calculated)

21181.4 Da

IEP (calculated)

4.684

GRAVY (calculated)

-0.093

Length

191 amino acids

Sequence
(BLAST)

001: MAAAVAASAS TPQGVAERRG IPAAAFVEDV EAYLRQAGLD VNSALAFLQE RLQQYKIVEM KLLAQQRDLQ AKIPDIEKCL DIVATLQAKK DLGEALIADF
101: ELSEGIYSRA KIEDTDSVCL WLGANVMLEY SCDEANALLK KNLENAKASL EVLVADLQFL RDQQTITQVT IARVFNWDVH QRRSKQAIKE T

Best Arabidopsis Sequence Match ( AT5G49510.1 )
(BLAST)

001: MSSSSPSGSG SDLTERRGIP AAKFIQDVET YLSQSGLDPN SALAFHQERL QQYKVVEMKL LAQQRDLQAK IPDIEKCLEV VATLEAKKGT GEALLADFEV
101: SEGIYSRACI EDTDSVCLWL GANVMLEYSC EEASALLKNN LENAKASLEV LVADLQFLRD QVTVTQVTIA RVYNWDVHQR RVKQVTPTAI AVADS

Arabidopsis Description

PFD3Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P57741]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.