Factsheet for TraesCS5B01G092100.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G099500.1	Wheat	cytosol	100.0	100.0
TraesCS5A01G086100.1	Wheat	cytosol	100.0	100.0
HORVU5Hr1G022470.1	Barley	cytosol	97.44	92.23
EES16167	Sorghum	cytosol	86.15	87.96
Os12t0562900-01	Rice	plastid	88.21	87.76
Zm00001d041597_P001	Maize	cytosol, extracellular	84.1	87.23
Zm00001d030627_P002	Maize	cytosol	84.1	86.77
GSMUA_Achr2P02060_001	Banana	plastid	76.41	77.6
VIT_05s0077g00740.t01	Wine grape	cytosol	73.85	76.6
KRH36957	Soybean	cytosol	72.82	75.13
Solyc05g053390.2.1	Tomato	cytosol	73.33	74.48
PGSC0003DMT400069969	Potato	cytosol, plastid	72.82	73.96
KRH11921	Soybean	cytosol	73.33	73.33
AT5G49510.1	Thale cress	cytosol	72.31	72.31
KRH50707	Soybean	cytosol	27.69	71.05
Bra036139.1-P	Field mustard	cytosol	71.28	70.92
CDY49601	Canola	cytosol	70.77	70.41
CDX86232	Canola	cytosol	70.26	70.26
CDX85412	Canola	cytosol	70.26	70.26
Bra010033.1-P	Field mustard	cytosol	70.26	70.26
CDY00028	Canola	cytosol	70.77	53.91
KRH02379	Soybean	cytosol	43.59	48.85

Protein Annotations

EnsemblPlants:TraesCS5B01G092100.2	EnsemblPlantsGene:TraesCS5B01G092100	Gene3D:1.10.287.370	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0016272
InterPro:IPR009053	InterPro:PFD3	InterPro:Prefoldin	InterPro:Prefoldin_subunit_alpha	PANTHER:PTHR12409	PFAM:PF02996
PIRSF:PIRSF016396	SEG:seg	SUPFAM:SSF46579	MapMan:20.3.2.3	:	:

Description

No Description!

Coordinates

chr5B:+:121000918..121004106

Molecular Weight (calculated)

21706.0 Da

IEP (calculated)

4.816

GRAVY (calculated)

-0.133

Length

195 amino acids

Sequence
(BLAST)

001: MAAATSSSAV AVSTPQGVAE RRGIPAASFV EDVETYLRQA GLEVNSALAF LQERLQQYKM VEMKLLAQQR ELQAKIPDIE KCLDIVATLK AKKALGEALI
101: ADFELSEGIY SRAKIEDSDS VCLWLGANVM LEYSCDEANE LLKSNLENAR ASLEVLVGDL HFLRDQQTIT QVTIARIFNW DVHQRRSKQS VMKET

Best Arabidopsis Sequence Match ( AT5G49510.1 )
(BLAST)

001: MSSSSPSGSG SDLTERRGIP AAKFIQDVET YLSQSGLDPN SALAFHQERL QQYKVVEMKL LAQQRDLQAK IPDIEKCLEV VATLEAKKGT GEALLADFEV
101: SEGIYSRACI EDTDSVCLWL GANVMLEYSC EEASALLKNN LENAKASLEV LVADLQFLRD QVTVTQVTIA RVYNWDVHQR RVKQVTPTAI AVADS

Arabidopsis Description

PFD3Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P57741]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.