Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041597_P001 | Maize | cytosol, extracellular | 95.24 | 95.74 |
| EES16167 | Sorghum | cytosol | 95.77 | 94.76 |
| Os12t0562900-01 | Rice | plastid | 90.48 | 87.24 |
| TraesCS5D01G099500.1 | Wheat | cytosol | 86.77 | 84.1 |
| TraesCS5B01G092100.2 | Wheat | golgi | 86.77 | 84.1 |
| TraesCS5A01G086100.1 | Wheat | cytosol | 86.77 | 84.1 |
| GSMUA_Achr2P02060_001 | Banana | plastid | 83.07 | 81.77 |
| Solyc05g053390.2.1 | Tomato | cytosol | 79.89 | 78.65 |
| HORVU5Hr1G022470.1 | Barley | cytosol | 85.71 | 78.64 |
| PGSC0003DMT400069969 | Potato | cytosol, plastid | 79.37 | 78.12 |
| VIT_05s0077g00740.t01 | Wine grape | cytosol | 77.25 | 77.66 |
| KRH36957 | Soybean | cytosol | 74.6 | 74.6 |
| AT5G49510.1 | Thale cress | cytosol | 76.72 | 74.36 |
| KRH50707 | Soybean | cytosol | 29.63 | 73.68 |
| KRH11921 | Soybean | cytosol | 75.66 | 73.33 |
| CDY49601 | Canola | cytosol | 73.55 | 70.92 |
| Bra036139.1-P | Field mustard | cytosol | 73.55 | 70.92 |
| CDX86232 | Canola | cytosol | 73.02 | 70.77 |
| CDX85412 | Canola | cytosol | 73.02 | 70.77 |
| Bra010033.1-P | Field mustard | cytosol | 73.02 | 70.77 |
| CDY00028 | Canola | cytosol | 73.55 | 54.3 |
| KRH02379 | Soybean | cytosol | 48.15 | 52.3 |
Protein Annotations
| Gene3D:1.10.287.370 | EntrezGene:100283660 | MapMan:20.3.2.3 | UniProt:B4FQ18 | EMBL:BT039206 | ncoils:Coil |
| GO:GO:0005575 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016272 | InterPro:IPR009053 |
| ProteinID:ONM01210.1 | PFAM:PF02996 | InterPro:PFD3 | PIRSF:PIRSF016396 | PANTHER:PTHR12409 | InterPro:Prefoldin |
| InterPro:Prefoldin_subunit_alpha | SUPFAM:SSF46579 | UniParc:UPI00017B78A8 | EnsemblPlantsGene:Zm00001d030627 | EnsemblPlants:Zm00001d030627_P002 | EnsemblPlants:Zm00001d030627_T002 |
Description
Probable prefoldin subunit 3
Coordinates
chr1:+:149688164..149696716
Molecular Weight (calculated)
20951.1 Da
IEP (calculated)
4.584
GRAVY (calculated)
-0.105
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAASASTP QGVAERRGIP AAAFVEDVEA YLRQAGLDVN SALAFLQERL QQYKIVEMKL LAQQRDLQAK IPDIEKCLDI VSTLQAKNDL GEALIADFEL
101: SEGIYSCAKI EDTDSVCLWL GANVMLEYSC DEANALLKKN LENAKASLEV LVADLQFLRD QQTITQVTIA RVFNWDVHHR RSKQAVKEP
101: SEGIYSCAKI EDTDSVCLWL GANVMLEYSC DEANALLKKN LENAKASLEV LVADLQFLRD QQTITQVTIA RVFNWDVHHR RSKQAVKEP
001: MSSSSPSGSG SDLTERRGIP AAKFIQDVET YLSQSGLDPN SALAFHQERL QQYKVVEMKL LAQQRDLQAK IPDIEKCLEV VATLEAKKGT GEALLADFEV
101: SEGIYSRACI EDTDSVCLWL GANVMLEYSC EEASALLKNN LENAKASLEV LVADLQFLRD QVTVTQVTIA RVYNWDVHQR RVKQVTPTAI AVADS
101: SEGIYSRACI EDTDSVCLWL GANVMLEYSC EEASALLKNN LENAKASLEV LVADLQFLRD QVTVTQVTIA RVYNWDVHQR RVKQVTPTAI AVADS
Arabidopsis Description
PFD3Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P57741]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.