Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014226.1-P | Field mustard | cytosol, plastid | 70.99 | 27.43 |
| CDY59371 | Canola | cytosol, plastid | 70.99 | 27.43 |
| CDY03579 | Canola | cytosol, plastid | 70.99 | 27.35 |
| Bra038220.1-P | Field mustard | cytosol, plastid | 70.23 | 27.06 |
| CDX95434 | Canola | cytosol, plastid | 70.23 | 27.06 |
| CDY42193 | Canola | cytosol, plastid | 70.23 | 27.06 |
| TraesCS4B01G246100.1 | Wheat | cytosol | 63.36 | 27.04 |
| KRG91104 | Soybean | nucleus | 70.99 | 27.03 |
| AT1G49910.1 | Thale cress | cytosol | 69.47 | 26.84 |
| KRH35682 | Soybean | nucleus | 69.47 | 26.76 |
| AT3G19590.1 | Thale cress | cytosol | 68.7 | 26.47 |
| KRG91092 | Soybean | nucleus | 68.7 | 26.47 |
| PGSC0003DMT400066160 | Potato | extracellular | 66.41 | 25.59 |
| Solyc01g107160.2.1 | Tomato | nucleus | 65.65 | 25.29 |
| EER87819 | Sorghum | cytosol | 64.89 | 24.78 |
| Os03t0448600-01 | Rice | cytosol | 64.89 | 24.78 |
| TraesCS4A01G058600.1 | Wheat | cytosol, plastid | 63.36 | 24.06 |
| TraesCS4D01G245500.2 | Wheat | cytosol, plastid | 63.36 | 24.06 |
| HORVU4Hr1G067810.1 | Barley | plastid | 62.6 | 20.5 |
| Os07t0588500-00 | Rice | cytosol | 55.73 | 20.05 |
| TraesCS2D01G193800.1 | Wheat | cytosol | 50.38 | 19.3 |
| TraesCS2A01G194000.1 | Wheat | cytosol | 50.38 | 19.08 |
| TraesCS2B01G212800.1 | Wheat | cytosol | 49.62 | 18.73 |
| KRH70829 | Soybean | cytosol | 32.82 | 13.03 |
| KRH74957 | Soybean | cytosol | 32.06 | 12.73 |
| GSMUA_Achr4P03390_001 | Banana | extracellular | 38.93 | 12.06 |
| KRH10504 | Soybean | cytosol, plastid | 29.77 | 11.24 |
| KRH75181 | Soybean | nucleus | 29.01 | 10.95 |
| KRH71020 | Soybean | cytosol, plastid | 29.01 | 10.95 |
| KRH43922 | Soybean | nucleus | 29.01 | 10.95 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | EMBL:ACUP02006697 | EnsemblPlantsGene:GLYMA_10G257700 | GO:GO:0000776 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0007049 | GO:GO:0007094 | GO:GO:0008150 | GO:GO:0009524 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0033597 | GO:GO:0043130 | GO:GO:1990298 | InterPro:IPR015943 | UniProt:K7LLF8 |
| EnsemblPlants:KRH35672 | ProteinID:KRH35672 | ProteinID:KRH35672.1 | PANTHER:PTHR10971 | PANTHER:PTHR10971:SF5 | SUPFAM:SSF50978 |
| UniParc:UPI0002966B17 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat_dom_sf | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:48408033..48409478
Molecular Weight (calculated)
14581.3 Da
IEP (calculated)
5.625
GRAVY (calculated)
0.073
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MRQGTYHIIC SSFSVFIYSG YALSSVEGRV VMEFFDLSEA SQAKIYAFKC HRKSEAGRDI VYPVNAIAFH PIYGTFATGV CDGCVNYSEY PTSIAALSFS
101: RDGRLLGFGC CINEEQDAIY VRNVNEIEVK P
101: RDGRLLGFGC CINEEQDAIY VRNVNEIEVK P
001: MTLVPAIGRE LSNPPSDGIS NLRFSNNSDH LLVSSWDKSV RLYDANGDLM RGEFKHGGAV LDCCFHDDSS GFSVCADTKV RRIDFNAGKE DVLGTHEKPV
101: RCVEYSYAAG QVITGSWDKT IKCWDPRGAS GTERTQIGTY MQPERVNSLS LVGNRLVVAT AGRHVNIYDL RNMSQPEQRR ESSLKYQTRC VRCYPNGTGY
201: ALSSVEGRVS MEFFDLSEAA QAKKYAFKCH RKSEDGRDIV YPVNAIAFHP IYGTFASGGC DGFVNIWDGN NKKRLYQYSK YPTSIAALSF SRDGGLLAVA
301: SSYTFEEGDK PHEPDAIFVR SVNEIEVKPK PKVYPNPPV
101: RCVEYSYAAG QVITGSWDKT IKCWDPRGAS GTERTQIGTY MQPERVNSLS LVGNRLVVAT AGRHVNIYDL RNMSQPEQRR ESSLKYQTRC VRCYPNGTGY
201: ALSSVEGRVS MEFFDLSEAA QAKKYAFKCH RKSEDGRDIV YPVNAIAFHP IYGTFASGGC DGFVNIWDGN NKKRLYQYSK YPTSIAALSF SRDGGLLAVA
301: SSYTFEEGDK PHEPDAIFVR SVNEIEVKPK PKVYPNPPV
Arabidopsis Description
BUB3.2BUB3.2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7L6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.