Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97470 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 81.31 | 42.03 |
| KRH31421 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 79.44 | 41.06 |
| VIT_01s0010g02430.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 75.7 | 39.13 |
| Bra017340.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 73.83 | 37.8 |
| CDY04187 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 73.83 | 37.8 |
| EES12410 | Sorghum | mitochondrion | 72.9 | 37.68 |
| CDY39177 | Canola | cytosol | 72.9 | 37.32 |
| Os04t0486500-01 | Rice | mitochondrion | 71.96 | 37.2 |
| TraesCS2B01G363300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 71.96 | 37.2 |
| PGSC0003DMT400045025 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 71.96 | 37.02 |
| TraesCS2A01G320000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 71.03 | 36.72 |
| AT3G25980.1 | Thale cress | cytosol | 71.03 | 36.36 |
| TraesCS2D01G343300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 70.09 | 36.23 |
| Solyc05g014370.2.1 | Tomato | mitochondrion | 70.09 | 36.06 |
| Zm00001d025721_P001 | Maize | mitochondrion | 70.09 | 34.88 |
| HORVU2Hr1G084050.1 | Barley | plastid | 71.03 | 27.94 |
| CDX83576 | Canola | extracellular, golgi | 21.5 | 16.43 |
| Zm00001d003249_P001 | Maize | mitochondrion | 60.75 | 13.66 |
| Bra025176.1-P | Field mustard | cytosol | 4.67 | 5.26 |
| GSMUA_Achr6P21190_001 | Banana | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:13.3.5.5.4 | Gene3D:3.30.900.10 | EMBL:ACUP02010134 | EnsemblPlantsGene:GLYMA_16G124100 | GO:GO:0007049 | GO:GO:0007094 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:HORMA_dom | InterPro:HORMA_dom_sf | InterPro:IPR003511 |
| InterPro:IPR036570 | UniProt:K7MGY1 | EnsemblPlants:KRH08024 | ProteinID:KRH08024 | ProteinID:KRH08024.1 | InterPro:Mad2 |
| PFAM:PF02301 | PFscan:PS50815 | PANTHER:PTHR11842 | PANTHER:PTHR11842:SF11 | SUPFAM:SSF56019 | UniParc:UPI00029551A9 |
Description
hypothetical protein
Coordinates
chr16:-:27347379..27348173
Molecular Weight (calculated)
12125.8 Da
IEP (calculated)
5.141
GRAVY (calculated)
0.179
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRTVAKDI ITLRGFAAII SEFFEIRYAA NNFMTVKKYG LPMLLTEYEG VKSFLANLTT QLSELLEAGK LQRVVLVIMS KATSEVLERW NFNIETNSEV
101: VENGWVT
101: VENGWVT
001: MASKTAAAKD IITLHGSAAI VSEFFCTILY NRAVYPEESF VKVKKYGLPM LLIEDESVKS FMSNLTSQIS EWLEAGKLQR VVLVIMSKAT GEVLERWNFR
101: IETDNEVVDK GVSREKSDKE IMREIQAIMR QVASSVTYLP CLDETCVFDV LAYTDTDVAV PFTWIESDPK LIANPQMVKL HGFDTKIHKV DTLVSYKNDE
201: WDEEE
101: IETDNEVVDK GVSREKSDKE IMREIQAIMR QVASSVTYLP CLDETCVFDV LAYTDTDVAV PFTWIESDPK LIANPQMVKL HGFDTKIHKV DTLVSYKNDE
201: WDEEE
Arabidopsis Description
MAD2Mitotic spindle checkpoint protein MAD2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU93]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.