CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	17.14	63.83
GSMUA_Achr10P...	Banana	cytosol	61.14	58.47
Os05t0400800-02	Rice	plastid	48.0	54.55
KRH20063	Soybean	mitochondrion, plastid	78.86	44.66
Bra023056.1-P	Field mustard	plastid	70.86	40.26
CDX79665	Canola	plastid	70.29	39.94
CDX84571	Canola	plastid	70.29	39.94
AT2G36230.1	Thale cress	mitochondrion, plastid	68.0	39.14
VIT_08s0007g03280.t01	Wine grape	plastid	69.14	38.17
Solyc05g056150.2.1	Tomato	plastid	68.0	38.14
CDX75060	Canola	plastid	68.57	37.97
PGSC0003DMT400059985	Potato	plastid	67.43	37.94
CDX84147	Canola	cytosol, plastid	66.29	37.66
Bra005290.1-P	Field mustard	plastid	68.0	37.66
EER92112	Sorghum	mitochondrion	61.71	35.18
TraesCS1D01G250600.1	Wheat	plastid	61.14	34.85
EES18196	Sorghum	mitochondrion	60.57	34.53
TraesCS1B01G261600.1	Wheat	plastid	60.57	34.53
TraesCS1A01G251000.1	Wheat	plastid	60.57	34.53
Zm00001d038142_P034	Maize	plastid	62.29	29.38
Zm00001d029548_P007	Maize	cytosol, mitochondrion	61.71	29.11
HORVU5Hr1G030850.1	Barley	cytosol, peroxisome	25.71	27.61
HORVU3Hr1G016160.2	Barley	plastid	29.14	24.06
GSMUA_Achr10P...	Banana	plastid	7.43	9.35
HORVU7Hr1G068820.1	Barley	plastid	4.57	7.14
OQU86211	Sorghum	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:3.20.20.70	MapMan:4.1.1.2.4	EMBL:ACUP02006155	InterPro:Aldolase_TIM	EnsemblPlantsGene:GLYMA_10G072300	GO:GO:0000105
GO:GO:0000162	GO:GO:0003674	GO:GO:0003824	GO:GO:0003949	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009987	InterPro:His_biosynth	InterPro:IPR013785	UniProt:K7LHX2	EnsemblPlants:KRH32745	ProteinID:KRH32745
ProteinID:KRH32745.1	PFAM:PF00977	PANTHER:PTHR43090	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366	UniParc:UPI000294B8FA

Description

hypothetical protein

Coordinates

chr10:+:7323262..7326739

Molecular Weight (calculated)

19174.3 Da

IEP (calculated)

5.007

GRAVY (calculated)

0.197

Length

175 amino acids

Sequence
(BLAST)

001: MPLHIYLKKR INFQPLSIHG CLQVGGGINS DNCLSCIEEG ASHVIVTSYV FNNGQMDLER LKDLVQIVGK ERLVLDLSCR KKSSVMFFVD PHVTEFLANF
101: ADEFLVHGVD VEGKKLRIDE ELVACFGKYS PIPVTYAGGV TEMADLERIK TAGLDGVNVT VGSALDSICL QEVVA

Best Arabidopsis Sequence Match ( AT2G36230.1 )
(BLAST)

001: MRTLSSQLYS NGGLTWFQKK NQSSLFIKHL RVSKPSRVQL ISAVQFRPCI DIHKGKVKQI VGSTLRDLKE DGSVLVTNFE SDKSAEEYAK MYKEDGLTGG
101: HVIMLGADPL SQAAAIGALH AYPGGLQVGG GINSENCMSY IEEGASHVIV TSYVFNNGKI DLERLKDIVS IVGKQRLILD LSCRKKDGRY AIVTDRWQKF
201: SDVILDEKSL EFLGGFSDEF LVHGVDVEGK KLGIDEELVA LLGNYSPIPV TYAGGVTVMD DVERIKDAGK GRVDVTVGSA LDIFGGNLPY KDVVAWHHKQ
301: HSLH

Arabidopsis Description

HISN31-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82782]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.