Factsheet for Zm00001d038142_P034

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18196	Sorghum	mitochondrion	76.28	92.18
Os05t0400800-02	Rice	plastid	36.39	87.66
TraesCS1D01G250600.1	Wheat	plastid	66.85	80.78
TraesCS1B01G261600.1	Wheat	plastid	66.85	80.78
TraesCS1A01G251000.1	Wheat	plastid	66.85	80.78
GSMUA_Achr10P...	Banana	cytosol	37.2	75.41
GSMUA_Achr10P...	Banana	cytosol	9.43	74.47
OQU86211	Sorghum	mitochondrion	21.29	72.48
Zm00001d029548_P007	Maize	cytosol, mitochondrion	69.0	69.0
HORVU3Hr1G016160.2	Barley	plastid	39.35	68.87
AT2G36230.1	Thale cress	mitochondrion, plastid	56.33	68.75
Bra023056.1-P	Field mustard	plastid	55.26	66.56
CDX79665	Canola	plastid	55.26	66.56
CDX84571	Canola	plastid	54.99	66.23
HORVU5Hr1G030850.1	Barley	cytosol, peroxisome	28.84	65.64
CDX75060	Canola	plastid	55.26	64.87
Bra005290.1-P	Field mustard	plastid	54.99	64.56
Solyc05g056150.2.1	Tomato	plastid	53.91	64.1
VIT_08s0007g03280.t01	Wine grape	plastid	54.72	64.04
KRH20063	Soybean	mitochondrion, plastid	53.1	63.75
PGSC0003DMT400059985	Potato	plastid	53.1	63.34
KRH32745	Soybean	cytosol, mitochondrion	29.38	62.29
CDX84147	Canola	cytosol, plastid	50.67	61.04
GSMUA_Achr10P...	Banana	plastid	18.87	50.36
HORVU7Hr1G068820.1	Barley	plastid	14.29	47.32

Protein Annotations

KEGG:00340+5.3.1.16	EntrezGene:100284229	Gene3D:3.20.20.70	MapMan:4.1.1.2.4	UniProt:A0A1D6M3T1	ProteinID:AQK85791.1
InterPro:Aldolase_TIM	GO:GO:0000105	GO:GO:0003674	GO:GO:0003824	GO:GO:0003949	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016853	InterPro:HisA_euk
InterPro:His_biosynth	InterPro:IPR013785	PFAM:PF00977	PANTHER:PTHR43090	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366
TIGRFAMs:TIGR02129	UniParc:UPI0008439639	EnsemblPlantsGene:Zm00001d038142	EnsemblPlants:Zm00001d038142_P034	EnsemblPlants:Zm00001d038142_T034	:

Description

1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase chloroplastic

Coordinates

chr6:+:149251081..149257465

Molecular Weight (calculated)

40550.1 Da

IEP (calculated)

8.618

GRAVY (calculated)

-0.012

Length

371 amino acids

Sequence
(BLAST)

001: MPLPPQPVRR SCPILLAVND TCGGKHGLSS VYPFVRISVA WRLILAHAPN LLRCSCLFAS SVTRMTSTCA ARVPSLRWAP QRGWVGSWVS VRPAKCRTSG
101: GHAVVCAAVS FRPCIDIHKG KVKQIVGSTL RDLANDSMEL VTNFESDKSP AEFAKFYKAD ELLGGHVIML GANPSSQAAA LEALRAYPGG LQVGGGINLE
201: NAMSYLNEGA SHVIVTSYVF SDGKMNTERL RKLVELVGKQ RLVLDLSCRK KDGRYTIVTD RWQKFSDVFV DEPTLEYLAA FADEFLVHGV DVEGKRLGID
301: EELVELLGHY SPIPVTYAGG VSTMDDLERI KKAGKSRVDV TIGSALDIFG GDLPYKDVVL WHRKQSMVGQ V

Best Arabidopsis Sequence Match ( AT2G36230.1 )
(BLAST)

001: MRTLSSQLYS NGGLTWFQKK NQSSLFIKHL RVSKPSRVQL ISAVQFRPCI DIHKGKVKQI VGSTLRDLKE DGSVLVTNFE SDKSAEEYAK MYKEDGLTGG
101: HVIMLGADPL SQAAAIGALH AYPGGLQVGG GINSENCMSY IEEGASHVIV TSYVFNNGKI DLERLKDIVS IVGKQRLILD LSCRKKDGRY AIVTDRWQKF
201: SDVILDEKSL EFLGGFSDEF LVHGVDVEGK KLGIDEELVA LLGNYSPIPV TYAGGVTVMD DVERIKDAGK GRVDVTVGSA LDIFGGNLPY KDVVAWHHKQ
301: HSLH

Arabidopsis Description

HISN31-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82782]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.