Factsheet for Os05t0400800-02

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 2
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
YLoc:	cytosol

plastid: 17189339

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	75.32	63.39
KRH32745	Soybean	cytosol, mitochondrion	54.55	48.0
GSMUA_Achr10P...	Banana	cytosol	14.29	46.81
TraesCS1D01G250600.1	Wheat	plastid	88.31	44.3
TraesCS1B01G261600.1	Wheat	plastid	88.31	44.3
TraesCS1A01G251000.1	Wheat	plastid	87.66	43.97
EER92112	Sorghum	mitochondrion	87.01	43.65
EES18196	Sorghum	mitochondrion	87.01	43.65
AT2G36230.1	Thale cress	mitochondrion, plastid	74.03	37.5
Bra023056.1-P	Field mustard	plastid	74.68	37.34
CDX79665	Canola	plastid	74.68	37.34
CDX84571	Canola	plastid	74.03	37.01
Bra005290.1-P	Field mustard	plastid	75.32	36.71
CDX75060	Canola	plastid	75.32	36.71
Zm00001d038142_P034	Maize	plastid	87.66	36.39
Zm00001d029548_P007	Maize	cytosol, mitochondrion	87.66	36.39
KRH20063	Soybean	mitochondrion, plastid	72.73	36.25
CDX84147	Canola	cytosol, plastid	72.08	36.04
VIT_08s0007g03280.t01	Wine grape	plastid	74.03	35.96
Solyc05g056150.2.1	Tomato	plastid	72.73	35.9
PGSC0003DMT400059985	Potato	plastid	72.08	35.69
HORVU3Hr1G016160.2	Barley	plastid	24.03	17.45
HORVU5Hr1G030850.1	Barley	cytosol, peroxisome	16.23	15.34
HORVU7Hr1G068820.1	Barley	plastid	2.6	3.57
OQU86211	Sorghum	mitochondrion	0.0	0.0
GSMUA_Achr10P...	Banana	plastid	0.0	0.0

Protein Annotations

Gene3D:3.20.20.70	MapMan:4.1.1.2.4	UniProt:A0A0P0WM04	InterPro:Aldolase_TIM	ProteinID:BAS93916.1	GO:GO:0000105
GO:GO:0000107	GO:GO:0003674	GO:GO:0003824	GO:GO:0003949	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016853	InterPro:His_biosynth
InterPro:IPR013785	EnsemblPlantsGene:Os05g0400800	EnsemblPlants:Os05t0400800-02	PFAM:PF00977	PANTHER:PTHR43090	InterPro:RibuloseP-bd_barrel
SUPFAM:SSF51366	UniParc:UPI000393B4CC	:	:	:	:

Description

Similar to 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplast precursor (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) (5-proFAR isomerase) (BBM II). (Os05t0400800-01);Similar to cDNA clone:J013037E09, full insert sequence. (Os05t0400800-02)

Coordinates

chr5:+:19494586..19497282

Molecular Weight (calculated)

17408.9 Da

IEP (calculated)

5.671

GRAVY (calculated)

-0.255

Length

154 amino acids

Sequence
(BLAST)

001: YVFSEGKMNI ERLKQLVDLV GKHRLVLDLS CRKKDGRYAI VTDRWQKFSD VFVDEPTLKH LAAYADEFLV HGVDVEGKRL GIDEELVELL GRYSPIPVTY
101: AGGVSTMDDL ERIKRAGNSR VDVTVGSALD IFGGDLPYKD VVLWHKEQNM VSQP

Best Arabidopsis Sequence Match ( AT2G36230.1 )
(BLAST)

001: MRTLSSQLYS NGGLTWFQKK NQSSLFIKHL RVSKPSRVQL ISAVQFRPCI DIHKGKVKQI VGSTLRDLKE DGSVLVTNFE SDKSAEEYAK MYKEDGLTGG
101: HVIMLGADPL SQAAAIGALH AYPGGLQVGG GINSENCMSY IEEGASHVIV TSYVFNNGKI DLERLKDIVS IVGKQRLILD LSCRKKDGRY AIVTDRWQKF
201: SDVILDEKSL EFLGGFSDEF LVHGVDVEGK KLGIDEELVA LLGNYSPIPV TYAGGVTVMD DVERIKDAGK GRVDVTVGSA LDIFGGNLPY KDVVAWHHKQ
301: HSLH

Arabidopsis Description

HISN31-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82782]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.