Factsheet for Zm00001d029548_P007

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
MultiLoc:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0400800-02	Rice	plastid	36.39	87.66
EER92112	Sorghum	mitochondrion	70.62	85.34
TraesCS1D01G250600.1	Wheat	plastid	65.5	79.15
TraesCS1B01G261600.1	Wheat	plastid	65.5	79.15
TraesCS1A01G251000.1	Wheat	plastid	65.23	78.83
GSMUA_Achr10P...	Banana	cytosol	36.66	74.32
GSMUA_Achr10P...	Banana	cytosol	9.16	72.34
HORVU5Hr1G030850.1	Barley	cytosol, peroxisome	30.46	69.33
Zm00001d038142_P034	Maize	plastid	69.0	69.0
AT2G36230.1	Thale cress	mitochondrion, plastid	55.26	67.43
CDX79665	Canola	plastid	54.99	66.23
Bra023056.1-P	Field mustard	plastid	54.99	66.23
CDX75060	Canola	plastid	56.33	66.14
KRH20063	Soybean	mitochondrion, plastid	54.99	66.02
CDX84571	Canola	plastid	54.72	65.91
Bra005290.1-P	Field mustard	plastid	56.06	65.82
HORVU3Hr1G016160.2	Barley	plastid	37.47	65.57
Solyc05g056150.2.1	Tomato	plastid	54.18	64.42
VIT_08s0007g03280.t01	Wine grape	plastid	54.99	64.35
PGSC0003DMT400059985	Potato	plastid	53.1	63.34
KRH32745	Soybean	cytosol, mitochondrion	29.11	61.71
CDX84147	Canola	cytosol, plastid	50.94	61.36
GSMUA_Achr10P...	Banana	plastid	19.95	53.24
HORVU7Hr1G068820.1	Barley	plastid	12.67	41.96

Protein Annotations

KEGG:00340+5.3.1.16	Gene3D:3.20.20.70	MapMan:4.1.1.2.4	UniProt:A0A1D6K5V3	InterPro:Aldolase_TIM	GO:GO:0000105
GO:GO:0003674	GO:GO:0003824	GO:GO:0003949	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016853	InterPro:HisA_euk	InterPro:His_biosynth	InterPro:IPR013785
ProteinID:ONL98948.1	PFAM:PF00977	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366	TIGRFAMs:TIGR02129	UniParc:UPI0008446F95
EnsemblPlantsGene:Zm00001d029548	EnsemblPlants:Zm00001d029548_P007	EnsemblPlants:Zm00001d029548_T007	SEG:seg	:	:

Description

csu3231-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase chloroplastic

Coordinates

chr1:-:75699307..75711574

Molecular Weight (calculated)

40586.9 Da

IEP (calculated)

7.737

GRAVY (calculated)

-0.053

Length

371 amino acids

Sequence
(BLAST)

001: MRLCPCDGVF EAAVRCRAIG LGARARESLP PWQSVEHSCR SAALALSRWL AAAPVVWWRM ASKYVARVPS PWWAPQRRLV GSWVSVCSVK CGALGGRDVV
101: CAAVSFRPCI DIHKGKVKQI VGSTLRDSSN DGMELVTNFE SDKSPAEFAK SYKEDELLGG HVIMLGSDPA SQAAALEALH AYPGGLQVGG GINLQNAMSY
201: LNEGASHVIV TSYVLSDGKM NIERLTKLVE LVGKQRLVLD LSCRKKDGRY TIVTDRWQKF SDVFVDEPAL EYLAAFADEF LVHGVDVEGK RLGIDEELVE
301: LLGHHSPIPV TYAGGVSTMD DLERIKKAGK SRVDVTVGSA LDIFGGDLPY KDVVLWHKKQ SMVGQVSRNM W

Best Arabidopsis Sequence Match ( AT2G36230.1 )
(BLAST)

001: MRTLSSQLYS NGGLTWFQKK NQSSLFIKHL RVSKPSRVQL ISAVQFRPCI DIHKGKVKQI VGSTLRDLKE DGSVLVTNFE SDKSAEEYAK MYKEDGLTGG
101: HVIMLGADPL SQAAAIGALH AYPGGLQVGG GINSENCMSY IEEGASHVIV TSYVFNNGKI DLERLKDIVS IVGKQRLILD LSCRKKDGRY AIVTDRWQKF
201: SDVILDEKSL EFLGGFSDEF LVHGVDVEGK KLGIDEELVA LLGNYSPIPV TYAGGVTVMD DVERIKDAGK GRVDVTVGSA LDIFGGNLPY KDVVAWHHKQ
301: HSLH

Arabidopsis Description

HISN31-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82782]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.