Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G016160.2 | Barley | plastid | 66.07 | 34.91 |
| OQU86211 | Sorghum | mitochondrion | 33.93 | 34.86 |
| GSMUA_Achr10P... | Banana | plastid | 31.25 | 25.18 |
| TraesCS1A01G251000.1 | Wheat | plastid | 68.75 | 25.08 |
| TraesCS1B01G261600.1 | Wheat | plastid | 67.86 | 24.76 |
| TraesCS1D01G250600.1 | Wheat | plastid | 66.96 | 24.43 |
| HORVU5Hr1G030850.1 | Barley | cytosol, peroxisome | 33.93 | 23.31 |
| EER92112 | Sorghum | mitochondrion | 51.79 | 18.89 |
| EES18196 | Sorghum | mitochondrion | 50.89 | 18.57 |
| Solyc05g056150.2.1 | Tomato | plastid | 40.18 | 14.42 |
| Zm00001d038142_P034 | Maize | plastid | 47.32 | 14.29 |
| VIT_08s0007g03280.t01 | Wine grape | plastid | 40.18 | 14.2 |
| PGSC0003DMT400059985 | Potato | plastid | 38.39 | 13.83 |
| CDX75060 | Canola | plastid | 38.39 | 13.61 |
| Bra005290.1-P | Field mustard | plastid | 38.39 | 13.61 |
| KRH20063 | Soybean | mitochondrion, plastid | 37.5 | 13.59 |
| AT2G36230.1 | Thale cress | mitochondrion, plastid | 35.71 | 13.16 |
| CDX79665 | Canola | plastid | 35.71 | 12.99 |
| Zm00001d029548_P007 | Maize | cytosol, mitochondrion | 41.96 | 12.67 |
| CDX84571 | Canola | plastid | 34.82 | 12.66 |
| Bra023056.1-P | Field mustard | plastid | 34.82 | 12.66 |
| CDX84147 | Canola | cytosol, plastid | 27.68 | 10.06 |
| KRH32745 | Soybean | cytosol, mitochondrion | 7.14 | 4.57 |
| GSMUA_Achr10P... | Banana | cytosol | 1.79 | 4.26 |
| GSMUA_Achr10P... | Banana | cytosol | 4.46 | 2.73 |
| Os05t0400800-02 | Rice | plastid | 3.57 | 2.6 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G068820.1 | EnsemblPlantsGene:HORVU7Hr1G068820 | Gene3D:3.20.20.70 | GO:GO:0003674 | GO:GO:0003824 | InterPro:Aldolase_TIM |
| InterPro:IPR013785 | UniParc:UPI000B46C021 | UniProt:A0A287WS88 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr7H:+:364415714..364418123
Molecular Weight (calculated)
11841.1 Da
IEP (calculated)
8.809
GRAVY (calculated)
-0.107
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRCVVKLP HPPCAALQHG RASSRVPARP TQSAASRERV VACAVSFRPC IDIHKGKVKQ IVGSTLRDAS DDGTTLVTNF ESDNTLGELC TSASGAPRIF
101: FVSTASNEMP SI
101: FVSTASNEMP SI
001: MRTLSSQLYS NGGLTWFQKK NQSSLFIKHL RVSKPSRVQL ISAVQFRPCI DIHKGKVKQI VGSTLRDLKE DGSVLVTNFE SDKSAEEYAK MYKEDGLTGG
101: HVIMLGADPL SQAAAIGALH AYPGGLQVGG GINSENCMSY IEEGASHVIV TSYVFNNGKI DLERLKDIVS IVGKQRLILD LSCRKKDGRY AIVTDRWQKF
201: SDVILDEKSL EFLGGFSDEF LVHGVDVEGK KLGIDEELVA LLGNYSPIPV TYAGGVTVMD DVERIKDAGK GRVDVTVGSA LDIFGGNLPY KDVVAWHHKQ
301: HSLH
101: HVIMLGADPL SQAAAIGALH AYPGGLQVGG GINSENCMSY IEEGASHVIV TSYVFNNGKI DLERLKDIVS IVGKQRLILD LSCRKKDGRY AIVTDRWQKF
201: SDVILDEKSL EFLGGFSDEF LVHGVDVEGK KLGIDEELVA LLGNYSPIPV TYAGGVTVMD DVERIKDAGK GRVDVTVGSA LDIFGGNLPY KDVVAWHHKQ
301: HSLH
Arabidopsis Description
HISN31-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82782]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.