CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005290.1-P	Field mustard	plastid	89.87	89.87
CDX79665	Canola	plastid	86.39	88.64
CDX84571	Canola	plastid	85.76	87.99
AT2G36230.1	Thale cress	mitochondrion, plastid	82.91	86.18
CDX84147	Canola	cytosol, plastid	77.22	79.22
Os05t0400800-02	Rice	plastid	36.71	75.32
GSMUA_Achr10P...	Banana	cytosol	41.77	72.13
KRH20063	Soybean	mitochondrion, plastid	70.25	71.84
VIT_08s0007g03280.t01	Wine grape	plastid	70.57	70.35
PGSC0003DMT400059985	Potato	plastid	68.04	69.13
Solyc05g056150.2.1	Tomato	plastid	68.04	68.91
KRH32745	Soybean	cytosol, mitochondrion	37.97	68.57
EES18196	Sorghum	mitochondrion	65.51	67.43
TraesCS1D01G250600.1	Wheat	plastid	64.87	66.78
TraesCS1A01G251000.1	Wheat	plastid	64.87	66.78
EER92112	Sorghum	mitochondrion	64.87	66.78
TraesCS1B01G261600.1	Wheat	plastid	64.56	66.45
GSMUA_Achr10P...	Banana	cytosol	9.49	63.83
HORVU5Hr1G030850.1	Barley	cytosol, peroxisome	31.33	60.74
HORVU3Hr1G016160.2	Barley	plastid	38.61	57.55
Zm00001d029548_P007	Maize	cytosol, mitochondrion	66.14	56.33
Zm00001d038142_P034	Maize	plastid	64.87	55.26
GSMUA_Achr10P...	Banana	plastid	21.84	49.64
OQU86211	Sorghum	mitochondrion	15.82	45.87
HORVU7Hr1G068820.1	Barley	plastid	13.61	38.39

Protein Annotations

KEGG:00340+5.3.1.16	Gene3D:3.20.20.70	MapMan:4.1.1.2.4	GO:A0A078CDW7	InterPro:Aldolase_TIM	EnsemblPlants:CDX75060
ProteinID:CDX75060	ProteinID:CDX75060.1	GO:GO:0000105	GO:GO:0003674	GO:GO:0003824	GO:GO:0003949
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00117092001	InterPro:HisA_euk
InterPro:His_biosynth	InterPro:IPR013785	PFAM:PF00977	PANTHER:PTHR43090	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366
TIGRFAMs:TIGR02129	UniPathway:UPA00031	UniParc:UPI0004EF2DFA	SEG:seg	:	:

Description

BnaA05g08060D

Coordinates

chrLK031802:+:2266598..2268255

Molecular Weight (calculated)

34505.3 Da

IEP (calculated)

7.010

GRAVY (calculated)

-0.210

Length

316 amino acids

Sequence
(BLAST)

001: MRTYSSQFYS NGGIPCFQKN QSSLFNKHPK LSVPLLSKKK KRPLRVQVVS AVQFRPCIDI HKGKVKQIVG STLSDSKEDG SVLVTNFESD KSAEEYAKMY
101: KEDGLTGGHV IMLGADPLSQ AAALGALHAY PGGLQVGGGI SSENCLSYIE EGASHVIVTS YVFNNGKLDL ERLKDLVKIV GKQRLILDLS CRKKDGRYAI
201: VTDRWQNFSD VLLDEKSLEF LGGFADEFLV HGVDVEGKKL GIDEELVALL GNYSPIPVTY AGGVTVMDDV ERIKEAGKGR VDVTVGSALD IFGGNLPYKD
301: VVAWHHQQQE SSSALH

Best Arabidopsis Sequence Match ( AT2G36230.1 )
(BLAST)

001: MRTLSSQLYS NGGLTWFQKK NQSSLFIKHL RVSKPSRVQL ISAVQFRPCI DIHKGKVKQI VGSTLRDLKE DGSVLVTNFE SDKSAEEYAK MYKEDGLTGG
101: HVIMLGADPL SQAAAIGALH AYPGGLQVGG GINSENCMSY IEEGASHVIV TSYVFNNGKI DLERLKDIVS IVGKQRLILD LSCRKKDGRY AIVTDRWQKF
201: SDVILDEKSL EFLGGFSDEF LVHGVDVEGK KLGIDEELVA LLGNYSPIPV TYAGGVTVMD DVERIKDAGK GRVDVTVGSA LDIFGGNLPY KDVVAWHHKQ
301: HSLH

Arabidopsis Description

HISN31-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82782]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.