Factsheet for GSMUA_Achr10P24190_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	22.4	87.23
Os05t0400800-02	Rice	plastid	63.39	75.32
KRH32745	Soybean	cytosol, mitochondrion	58.47	61.14
EER92112	Sorghum	mitochondrion	75.96	45.28
AT2G36230.1	Thale cress	mitochondrion, plastid	74.32	44.74
EES18196	Sorghum	mitochondrion	74.32	44.3
TraesCS1A01G251000.1	Wheat	plastid	73.77	43.97
TraesCS1B01G261600.1	Wheat	plastid	73.77	43.97
KRH20063	Soybean	mitochondrion, plastid	73.77	43.69
TraesCS1D01G250600.1	Wheat	plastid	73.22	43.65
VIT_08s0007g03280.t01	Wine grape	plastid	75.41	43.53
PGSC0003DMT400059985	Potato	plastid	73.77	43.41
Solyc05g056150.2.1	Tomato	plastid	73.22	42.95
Bra023056.1-P	Field mustard	plastid	72.13	42.86
CDX84571	Canola	plastid	71.58	42.53
CDX79665	Canola	plastid	71.58	42.53
CDX84147	Canola	cytosol, plastid	71.04	42.21
CDX75060	Canola	plastid	72.13	41.77
Bra005290.1-P	Field mustard	plastid	72.13	41.77
Zm00001d038142_P034	Maize	plastid	75.41	37.2
Zm00001d029548_P007	Maize	cytosol, mitochondrion	74.32	36.66
HORVU5Hr1G030850.1	Barley	cytosol, peroxisome	26.23	29.45
HORVU3Hr1G016160.2	Barley	plastid	29.51	25.47
GSMUA_Achr10P...	Banana	plastid	3.83	5.04
HORVU7Hr1G068820.1	Barley	plastid	2.73	4.46
OQU86211	Sorghum	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00340+5.3.1.16	Gene3D:3.20.20.70	MapMan:4.1.1.2.4	InterPro:Aldolase_TIM	GO:GO:0000105	GO:GO:0003674
GO:GO:0003824	GO:GO:0003949	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016853	EnsemblPlantsGene:GSMUA_Achr10G24190_001	EnsemblPlants:GSMUA_Achr10P24190_001	EnsemblPlants:GSMUA_Achr10T24190_001	InterPro:HisA_euk
InterPro:His_biosynth	InterPro:IPR013785	UniProt:M0RKZ4	PFAM:PF00977	PANTHER:PTHR43090	InterPro:RibuloseP-bd_barrel
SUPFAM:SSF51366	TIGRFAMs:TIGR02129	UniParc:UPI000296DD1A	:	:	:

Description

1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G24190_001]

Coordinates

chr10:-:28627637..28632050

Molecular Weight (calculated)

20297.5 Da

IEP (calculated)

4.893

GRAVY (calculated)

-0.115

Length

183 amino acids

Sequence
(BLAST)

001: MQVGGGINAD NAMNYLEEGA SHVIVTSYVF SDGKMDLERL KHLVNMIGKD RLVLDLSCRK KDGKYSIVTD RWQKFSDVIL DKETLEFLAK YSDEFLIHGV
101: DVEGKRLGID EELVMLLGCY SPIPVTYAGG VTTMADLEKI KTAGKEQVDV TVGSALDIFG GNMAYKEVVA WHNKQVMISQ QPS

Best Arabidopsis Sequence Match ( AT2G36230.1 )
(BLAST)

001: MRTLSSQLYS NGGLTWFQKK NQSSLFIKHL RVSKPSRVQL ISAVQFRPCI DIHKGKVKQI VGSTLRDLKE DGSVLVTNFE SDKSAEEYAK MYKEDGLTGG
101: HVIMLGADPL SQAAAIGALH AYPGGLQVGG GINSENCMSY IEEGASHVIV TSYVFNNGKI DLERLKDIVS IVGKQRLILD LSCRKKDGRY AIVTDRWQKF
201: SDVILDEKSL EFLGGFSDEF LVHGVDVEGK KLGIDEELVA LLGNYSPIPV TYAGGVTVMD DVERIKDAGK GRVDVTVGSA LDIFGGNLPY KDVVAWHHKQ
301: HSLH

Arabidopsis Description

HISN31-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82782]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.