Factsheet for HORVU5Hr1G030850.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

plastid 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	20.25	70.21
HORVU3Hr1G016160.2	Barley	plastid	74.85	57.55
OQU86211	Sorghum	mitochondrion	30.06	44.95
GSMUA_Achr10P...	Banana	plastid	36.2	42.45
TraesCS1A01G251000.1	Wheat	plastid	77.3	41.04
TraesCS1B01G261600.1	Wheat	plastid	77.3	41.04
TraesCS1D01G250600.1	Wheat	plastid	76.69	40.72
EER92112	Sorghum	mitochondrion	68.71	36.48
EES18196	Sorghum	mitochondrion	66.87	35.5
HORVU7Hr1G068820.1	Barley	plastid	23.31	33.93
AT2G36230.1	Thale cress	mitochondrion, plastid	61.96	33.22
VIT_08s0007g03280.t01	Wine grape	plastid	63.19	32.49
CDX84571	Canola	plastid	60.12	31.82
Bra023056.1-P	Field mustard	plastid	60.12	31.82
CDX79665	Canola	plastid	59.51	31.49
CDX75060	Canola	plastid	60.74	31.33
PGSC0003DMT400059985	Potato	plastid	58.9	30.87
Bra005290.1-P	Field mustard	plastid	59.51	30.7
Zm00001d029548_P007	Maize	cytosol, mitochondrion	69.33	30.46
Solyc05g056150.2.1	Tomato	plastid	57.67	30.13
KRH20063	Soybean	mitochondrion, plastid	56.44	29.77
CDX84147	Canola	cytosol, plastid	55.83	29.55
Zm00001d038142_P034	Maize	plastid	65.64	28.84
GSMUA_Achr10P...	Banana	cytosol	29.45	26.23
KRH32745	Soybean	cytosol, mitochondrion	27.61	25.71
Os05t0400800-02	Rice	plastid	15.34	16.23

Protein Annotations

EnsemblPlants:HORVU5Hr1G030850.1	EnsemblPlantsGene:HORVU5Hr1G030850	Gene3D:3.20.20.70	GO:GO:0000105	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	InterPro:Aldolase_TIM
InterPro:His_biosynth	InterPro:IPR013785	InterPro:RibuloseP-bd_barrel	PANTHER:PTHR43090	PFAM:PF00977	SUPFAM:SSF51366
UniParc:UPI000B466413	UniProt:A0A287QT59	MapMan:4.1.1.2.4	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:191373128..191375407

Molecular Weight (calculated)

17904.3 Da

IEP (calculated)

5.229

GRAVY (calculated)

-0.150

Length

163 amino acids

Sequence
(BLAST)

001: SVGMEPFASF LYPTVVHEGK VKQIVGSTLR DASDDGTTLV TNFESDNSLA EFANIYKEDG LVGGHYRMLG GDPASRSAAL EALHAYPGCL QVGGGINLEN
101: AMSYLNEGAS HVIVTSYVFS DGKMNIERLT HIVEFLGKQR LILDRSCRKK EITYGWKFFD EAM

Best Arabidopsis Sequence Match ( AT2G36230.1 )
(BLAST)

001: MRTLSSQLYS NGGLTWFQKK NQSSLFIKHL RVSKPSRVQL ISAVQFRPCI DIHKGKVKQI VGSTLRDLKE DGSVLVTNFE SDKSAEEYAK MYKEDGLTGG
101: HVIMLGADPL SQAAAIGALH AYPGGLQVGG GINSENCMSY IEEGASHVIV TSYVFNNGKI DLERLKDIVS IVGKQRLILD LSCRKKDGRY AIVTDRWQKF
201: SDVILDEKSL EFLGGFSDEF LVHGVDVEGK KLGIDEELVA LLGNYSPIPV TYAGGVTVMD DVERIKDAGK GRVDVTVGSA LDIFGGNLPY KDVVAWHHKQ
301: HSLH

Arabidopsis Description

HISN31-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82782]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.