Factsheet for HORVU3Hr1G016160.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G030850.1	Barley	cytosol, peroxisome	57.55	74.85
GSMUA_Achr10P...	Banana	cytosol	16.04	72.34
HORVU7Hr1G068820.1	Barley	plastid	34.91	66.07
TraesCS1A01G251000.1	Wheat	plastid	86.79	59.93
TraesCS1B01G261600.1	Wheat	plastid	86.32	59.61
TraesCS1D01G250600.1	Wheat	plastid	85.85	59.28
OQU86211	Sorghum	mitochondrion	30.19	58.72
GSMUA_Achr10P...	Banana	plastid	34.43	52.52
EER92112	Sorghum	mitochondrion	71.23	49.19
EES18196	Sorghum	mitochondrion	69.81	48.21
Zm00001d038142_P034	Maize	plastid	68.87	39.35
CDX84571	Canola	plastid	57.08	39.29
Bra023056.1-P	Field mustard	plastid	56.6	38.96
AT2G36230.1	Thale cress	mitochondrion, plastid	55.66	38.82
VIT_08s0007g03280.t01	Wine grape	plastid	58.02	38.8
CDX75060	Canola	plastid	57.55	38.61
CDX79665	Canola	plastid	55.66	38.31
KRH20063	Soybean	mitochondrion, plastid	55.19	37.86
Solyc05g056150.2.1	Tomato	plastid	55.66	37.82
Bra005290.1-P	Field mustard	plastid	56.13	37.66
PGSC0003DMT400059985	Potato	plastid	55.19	37.62
Zm00001d029548_P007	Maize	cytosol, mitochondrion	65.57	37.47
CDX84147	Canola	cytosol, plastid	51.89	35.71
GSMUA_Achr10P...	Banana	cytosol	25.47	29.51
KRH32745	Soybean	cytosol, mitochondrion	24.06	29.14
Os05t0400800-02	Rice	plastid	17.45	24.03

Protein Annotations

EnsemblPlants:HORVU3Hr1G016160.2	EnsemblPlantsGene:HORVU3Hr1G016160	Gene3D:3.20.20.70	GO:GO:0000105	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	InterPro:Aldolase_TIM
InterPro:His_biosynth	InterPro:IPR013785	InterPro:RibuloseP-bd_barrel	PANTHER:PTHR43090	PFAM:PF00977	SEG:seg
SUPFAM:SSF51366	UniParc:UPI000B4776FE	UniProt:A0A287K891	MapMan:4.1.1.2.4	:	:

Description

No Description!

Coordinates

chrchr3H:-:38637821..38640401

Molecular Weight (calculated)

22739.2 Da

IEP (calculated)

10.089

GRAVY (calculated)

-0.330

Length

212 amino acids

Sequence
(BLAST)

001: MASRCAAKLP HSPCTAPQHG RASSRVPARS AQSAASRGRA VACAFSFRPC IDIHKAKVKQ IVGSTLRDAS DDGTALVTNF ESDKSPAEFA NIYKEDGLVG
101: GHVIMLGGDP ASRSTALEAL HAYPGGLQVG GGINLENAMS YLNEGASHVI VTSYVFSDGK MNIERLTQLV ELVGKRRLIL DLSCRKKDKR TRTTTTTDEA
201: MRRLKGSNLK TH

Best Arabidopsis Sequence Match ( AT2G36230.1 )
(BLAST)

001: MRTLSSQLYS NGGLTWFQKK NQSSLFIKHL RVSKPSRVQL ISAVQFRPCI DIHKGKVKQI VGSTLRDLKE DGSVLVTNFE SDKSAEEYAK MYKEDGLTGG
101: HVIMLGADPL SQAAAIGALH AYPGGLQVGG GINSENCMSY IEEGASHVIV TSYVFNNGKI DLERLKDIVS IVGKQRLILD LSCRKKDGRY AIVTDRWQKF
201: SDVILDEKSL EFLGGFSDEF LVHGVDVEGK KLGIDEELVA LLGNYSPIPV TYAGGVTVMD DVERIKDAGK GRVDVTVGSA LDIFGGNLPY KDVVAWHHKQ
301: HSLH

Arabidopsis Description

HISN31-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82782]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.