Factsheet for Solyc05g056150.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059985	Potato	plastid	92.63	92.93
VIT_08s0007g03280.t01	Wine grape	plastid	74.68	73.5
GSMUA_Achr10P...	Banana	cytosol	42.95	73.22
Os05t0400800-02	Rice	plastid	35.9	72.73
AT2G36230.1	Thale cress	mitochondrion, plastid	69.55	71.38
Bra023056.1-P	Field mustard	plastid	68.91	69.81
KRH20063	Soybean	mitochondrion, plastid	68.91	69.58
CDX79665	Canola	plastid	68.59	69.48
CDX84571	Canola	plastid	68.59	69.48
Bra005290.1-P	Field mustard	plastid	69.55	68.67
CDX75060	Canola	plastid	68.91	68.04
KRH32745	Soybean	cytosol, mitochondrion	38.14	68.0
EER92112	Sorghum	mitochondrion	65.06	66.12
CDX84147	Canola	cytosol, plastid	64.42	65.26
TraesCS1D01G250600.1	Wheat	plastid	64.1	65.15
TraesCS1A01G251000.1	Wheat	plastid	64.1	65.15
EES18196	Sorghum	mitochondrion	63.78	64.82
TraesCS1B01G261600.1	Wheat	plastid	63.78	64.82
GSMUA_Achr10P...	Banana	cytosol	9.29	61.7
HORVU5Hr1G030850.1	Barley	cytosol, peroxisome	30.13	57.67
HORVU3Hr1G016160.2	Barley	plastid	37.82	55.66
Zm00001d029548_P007	Maize	cytosol, mitochondrion	64.42	54.18
Zm00001d038142_P034	Maize	plastid	64.1	53.91
GSMUA_Achr10P...	Banana	plastid	23.08	51.8
OQU86211	Sorghum	mitochondrion	15.38	44.04
HORVU7Hr1G068820.1	Barley	plastid	14.42	40.18

Protein Annotations

KEGG:00340+5.3.1.16	Gene3D:3.20.20.70	MapMan:4.1.1.2.4	InterPro:Aldolase_TIM	GO:GO:0000105	GO:GO:0000162
GO:GO:0003674	GO:GO:0003824	GO:GO:0003949	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016853	InterPro:HisA_euk	InterPro:His_biosynth	InterPro:IPR013785
UniProt:K4C2T9	PFAM:PF00977	PANTHER:PTHR43090	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366	EnsemblPlantsGene:Solyc05g056150.2
EnsemblPlants:Solyc05g056150.2.1	TIGRFAMs:TIGR02129	UniParc:UPI00027656F8	:	:	:

Description

1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:K4C2T9]

Coordinates

chr5:-:65545766..65551123

Molecular Weight (calculated)

33598.3 Da

IEP (calculated)

5.618

GRAVY (calculated)

-0.004

Length

312 amino acids

Sequence
(BLAST)

001: MQTSASSLHN LFLGKNLSYA PPYTLSRALD FIPAMASSSV GPQRLSVQCG VGFRPCIDIH KGKVKQIVGS TLRDSKEADT SLVTNFESDK SAAEYAKLYR
101: DDGLDGGHVI MLGADPLSIA AATEALHAYP GGLQVGGGIK TENALSYIEE GASHVIVTSY VFNNGQMDLE RLKELSSLVG RKRLVLDLSC RKKEGEYVIV
201: TDRWQKFSDV HLNEKVLNFL AEYADEFLVH GVDVEGKKLG IDEELVALLG KYSPIPVTYA GGVTGMADLE KIKVAGMGRV DVTVGSALDI FGGNLAYKDV
301: VAWHALQDSL AV

Best Arabidopsis Sequence Match ( AT2G36230.1 )
(BLAST)

001: MRTLSSQLYS NGGLTWFQKK NQSSLFIKHL RVSKPSRVQL ISAVQFRPCI DIHKGKVKQI VGSTLRDLKE DGSVLVTNFE SDKSAEEYAK MYKEDGLTGG
101: HVIMLGADPL SQAAAIGALH AYPGGLQVGG GINSENCMSY IEEGASHVIV TSYVFNNGKI DLERLKDIVS IVGKQRLILD LSCRKKDGRY AIVTDRWQKF
201: SDVILDEKSL EFLGGFSDEF LVHGVDVEGK KLGIDEELVA LLGNYSPIPV TYAGGVTVMD DVERIKDAGK GRVDVTVGSA LDIFGGNLPY KDVVAWHHKQ
301: HSLH

Arabidopsis Description

HISN31-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82782]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.