Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70967 | Soybean | nucleus | 84.05 | 86.68 |
| VIT_03s0038g03100.t01 | Wine grape | nucleus | 49.42 | 50.87 |
| GSMUA_Achr6P00840_001 | Banana | cytosol | 33.54 | 45.97 |
| AT4G38440.1 | Thale cress | nucleus | 40.69 | 45.8 |
| Solyc01g111910.2.1 | Tomato | nucleus | 42.03 | 44.54 |
| TraesCS7B01G263600.1 | Wheat | nucleus | 37.6 | 41.03 |
| TraesCS7D01G358700.1 | Wheat | nucleus | 37.66 | 40.86 |
| TraesCS7A01G364300.1 | Wheat | nucleus | 37.6 | 40.82 |
| HORVU7Hr1G086420.15 | Barley | cytosol, mitochondrion | 37.9 | 40.51 |
| EER89976 | Sorghum | cytosol | 37.78 | 40.22 |
| Zm00001d046366_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 37.3 | 39.96 |
| Os06t0574400-01 | Rice | endoplasmic reticulum, plasma membrane | 18.74 | 39.56 |
| Bra025599.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 38.08 | 36.73 |
| CDY44583 | Canola | cytosol, nucleus, plasma membrane, plastid | 38.14 | 36.72 |
| CDY36825 | Canola | cytosol | 37.9 | 36.55 |
| Os06t0574450-00 | Rice | nucleus | 9.46 | 33.62 |
Protein Annotations
| EntrezGene:100796310 | MapMan:15.3.6.5 | UniProt:A0A0R0LFZ5 | EMBL:ACUP02000123 | InterPro:ARM-type_fold | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_01G063600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlants:KRH75108 | ProteinID:KRH75108 | ProteinID:KRH75108.1 |
| PFAM:PF08620 | PFAM:PF08621 | PANTHER:PTHR21483 | InterPro:RNA_pol_II_AP1_C | InterPro:RNA_pol_II_AP1_N | SUPFAM:SSF48371 |
| TMHMM:TMhelix | UniParc:UPI0003DE99D0 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:9070531..9090575
Molecular Weight (calculated)
185214.0 Da
IEP (calculated)
6.262
GRAVY (calculated)
-0.280
Length
1649 amino acids
Sequence
(BLAST)
(BLAST)
0001: MYEEHCWCRK KISRQATHAQ NIALQSFTLF LPSLTFSVLF RFFLCCIGPV CCTMENQKGK GGEQPKKKVV NTSSLQINQN DSFHLVGSIV EKGISDSHNN
0101: NPTTTPFHFF PKPTVLPFPV ARHRSHGPHW RPLSSKGNDD GEGDDNVEDE EDKNFQEFEK VSAFAMPVQR RRKKGLDFRK WKEITRDDSS SMGKETEEDV
0201: SSFSQTTGKK NKKGSKSTYK KTSSSDDNVI SPMKVDTKPL LDNSDGGFIN STTTMEVDTS NKVNHQAKVK YTRIFDDKGQ NESVPGLDQI SSDRMADYNF
0301: GSLDLQRPGQ TDLTSSMRSC PSSNSIRSEK ESVSLESEID AENRAQIQQM SAEEIAEAQA EIMEKMSPAL LKALQKRGQD KLKKLKSEVG TGSDSVNGHV
0401: QSPQDAKHLH TEDGITQTVI APPSKEKLDD EKISTKTSTT ASSSAWNAWS NRVEAVRELR FSLAGDVVDS ERVSVYDNVN ERDYLRTEGD PGASGYTIKE
0501: AVALTRSVIP GQRALALHLL SSVLDKALHY ICKDRTGYMT KNENKVDKSV DWEAVWAFAL GPEPELVLSL RICLDDNHNS VVLACTKVVQ SVLSYDANEN
0601: YCDMSEKIAT CDMDICTAPV FRSRPDINDG FLQGGFWKYS AKPSNILPFS DDSMDNETEG KHTIQDDIVV AAQDFTVGLV RMGILPRLRY LLEKDPTTAL
0701: EECIISILIA IARHSPTCAN AVLKCERLVQ TIVNRFTADN FELRSSMTKS VKLLKVFARL DQKTCLEFIK KGYFQAMTWN LYQSPSSVDH WLRLGKEKCK
0801: LTSALIVEQM RFWRVCIQYG YCVSYFLEMF PALCFWLNPP SFEKLVENDV LDESTSISRE AYLVLESLAG RLPNLFSKQC LNNQLPESAG DTEVWSWNYV
0901: GPMVDLAIKW IASRSDPEVS KFFEGQKEGR CDFPFRDLSA TPLLWVYAAV TRMLFRVLER MTWGDTISSF ETEGHVPWLP EFVPKIGLEL IKYWFLGFSA
1001: SFGAKFGRDS EGESFMKELV YLRQKDDIEM SLASTCCLNG MVKIITTIDN LILSAKAGIC SLPRQEQSLS KEGKVLEDGI VNGCLVELRY MLDAFMFSVS
1101: SGWHHIQSIE SFGRGGPVPG AGIGWGAPSG GFWSATFLLA QIDAKFLVSL LEIFENASKG VVTEETTFII QRVNAGLGLC LTAGPREKVV VEKALDLLFH
1201: VSVLKNLDLC IHNFLFNRRG RTFGWQHEEE DYMHLRRMLS SHFRSRWLSV KVKSKSVDGS SSSGIKTSPK VGACLETIYE DSDMSSMTSP CCNSLMIEWA
1301: HQKLPLPVHF YLSPISTIFH SKRAGTKKVD DVLHDPSYLI EVAKCGLFFV LGVEAMSIFH GTDIPSPVEQ VSLTWKLHSL SVNFLVGMEI LEQDRSRVTF
1401: EALQDLYGEL LDKARLNQSK EVISNDKKHL EFLRFQTEIH ESYSTFLEEL VEQFSAVSYG DVIFGRQVSL YLHRYVETSI RLAAWNTLSN ARVLELLPPL
1501: EKCFSGAEGY LEPAEDNEAI LEAYTKSWVS DALDRAAIRG SVAYTLVVHH LSSFIFHACP MDKLLLRNRL ARSLLRDYAG KQQHEGMLLN LIHHNKPPPS
1601: VMGEELNGGV LSERNWLESR LKVLVEACEG NSSLLIVVEK LKAAVEKSS
0101: NPTTTPFHFF PKPTVLPFPV ARHRSHGPHW RPLSSKGNDD GEGDDNVEDE EDKNFQEFEK VSAFAMPVQR RRKKGLDFRK WKEITRDDSS SMGKETEEDV
0201: SSFSQTTGKK NKKGSKSTYK KTSSSDDNVI SPMKVDTKPL LDNSDGGFIN STTTMEVDTS NKVNHQAKVK YTRIFDDKGQ NESVPGLDQI SSDRMADYNF
0301: GSLDLQRPGQ TDLTSSMRSC PSSNSIRSEK ESVSLESEID AENRAQIQQM SAEEIAEAQA EIMEKMSPAL LKALQKRGQD KLKKLKSEVG TGSDSVNGHV
0401: QSPQDAKHLH TEDGITQTVI APPSKEKLDD EKISTKTSTT ASSSAWNAWS NRVEAVRELR FSLAGDVVDS ERVSVYDNVN ERDYLRTEGD PGASGYTIKE
0501: AVALTRSVIP GQRALALHLL SSVLDKALHY ICKDRTGYMT KNENKVDKSV DWEAVWAFAL GPEPELVLSL RICLDDNHNS VVLACTKVVQ SVLSYDANEN
0601: YCDMSEKIAT CDMDICTAPV FRSRPDINDG FLQGGFWKYS AKPSNILPFS DDSMDNETEG KHTIQDDIVV AAQDFTVGLV RMGILPRLRY LLEKDPTTAL
0701: EECIISILIA IARHSPTCAN AVLKCERLVQ TIVNRFTADN FELRSSMTKS VKLLKVFARL DQKTCLEFIK KGYFQAMTWN LYQSPSSVDH WLRLGKEKCK
0801: LTSALIVEQM RFWRVCIQYG YCVSYFLEMF PALCFWLNPP SFEKLVENDV LDESTSISRE AYLVLESLAG RLPNLFSKQC LNNQLPESAG DTEVWSWNYV
0901: GPMVDLAIKW IASRSDPEVS KFFEGQKEGR CDFPFRDLSA TPLLWVYAAV TRMLFRVLER MTWGDTISSF ETEGHVPWLP EFVPKIGLEL IKYWFLGFSA
1001: SFGAKFGRDS EGESFMKELV YLRQKDDIEM SLASTCCLNG MVKIITTIDN LILSAKAGIC SLPRQEQSLS KEGKVLEDGI VNGCLVELRY MLDAFMFSVS
1101: SGWHHIQSIE SFGRGGPVPG AGIGWGAPSG GFWSATFLLA QIDAKFLVSL LEIFENASKG VVTEETTFII QRVNAGLGLC LTAGPREKVV VEKALDLLFH
1201: VSVLKNLDLC IHNFLFNRRG RTFGWQHEEE DYMHLRRMLS SHFRSRWLSV KVKSKSVDGS SSSGIKTSPK VGACLETIYE DSDMSSMTSP CCNSLMIEWA
1301: HQKLPLPVHF YLSPISTIFH SKRAGTKKVD DVLHDPSYLI EVAKCGLFFV LGVEAMSIFH GTDIPSPVEQ VSLTWKLHSL SVNFLVGMEI LEQDRSRVTF
1401: EALQDLYGEL LDKARLNQSK EVISNDKKHL EFLRFQTEIH ESYSTFLEEL VEQFSAVSYG DVIFGRQVSL YLHRYVETSI RLAAWNTLSN ARVLELLPPL
1501: EKCFSGAEGY LEPAEDNEAI LEAYTKSWVS DALDRAAIRG SVAYTLVVHH LSSFIFHACP MDKLLLRNRL ARSLLRDYAG KQQHEGMLLN LIHHNKPPPS
1601: VMGEELNGGV LSERNWLESR LKVLVEACEG NSSLLIVVEK LKAAVEKSS
0001: MEQSSGRVNP EQPNNVLASL VGSIVEKGIS ENKPPSKPLP PRPSLLSFPV ARHRSHGPHL APVGSSIAQP KDYNDDQEEE EAEERFMNAD SIAAFAKPLQ
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
Arabidopsis Description
IYOTranscriptional elongation regulator MINIYO [Source:UniProtKB/Swiss-Prot;Acc:Q8GYU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.