Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025599.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 93.23 | 93.39 |
| CDY36825 | Canola | cytosol | 89.43 | 89.59 |
| AT4G38440.1 | Thale cress | nucleus | 57.21 | 66.89 |
| VIT_03s0038g03100.t01 | Wine grape | nucleus | 38.65 | 41.32 |
| GSMUA_Achr6P00840_001 | Banana | cytosol | 28.78 | 40.98 |
| KRH70967 | Soybean | nucleus | 37.36 | 40.02 |
| KRH75108 | Soybean | golgi, mitochondrion, nucleus, plasma membrane | 36.72 | 38.14 |
| Solyc01g111910.2.1 | Tomato | nucleus | 34.27 | 37.72 |
| TraesCS7B01G263600.1 | Wheat | nucleus | 32.46 | 36.8 |
| TraesCS7A01G364300.1 | Wheat | nucleus | 32.46 | 36.6 |
| TraesCS7D01G358700.1 | Wheat | nucleus | 32.4 | 36.51 |
| HORVU7Hr1G086420.15 | Barley | cytosol, mitochondrion | 32.17 | 35.71 |
| Os06t0574400-01 | Rice | endoplasmic reticulum, plasma membrane | 16.23 | 35.6 |
| EER89976 | Sorghum | cytosol | 31.93 | 35.31 |
| Zm00001d046366_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 31.35 | 34.89 |
| Os06t0574450-00 | Rice | nucleus | 7.01 | 25.86 |
Protein Annotations
| MapMan:15.3.6.5 | MapMan:24.2.1.5 | GO:A0A078I652 | UniProt:A0A078I652 | InterPro:ARM-type_fold | EnsemblPlants:CDY44583 |
| ProteinID:CDY44583 | ProteinID:CDY44583.1 | ncoils:Coil | InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00080504001 | PFAM:PF00892 | PFAM:PF08620 |
| PFAM:PF08621 | PANTHER:PTHR21483 | InterPro:RNA_pol_II_AP1_C | InterPro:RNA_pol_II_AP1_N | SUPFAM:SSF103481 | SUPFAM:SSF48371 |
| TMHMM:TMhelix | UniParc:UPI0004EE81AD | SEG:seg | : | : | : |
Description
BnaA04g10070DBnaA04g10070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I652]
Coordinates
chrLK032595:+:104492..113291
Molecular Weight (calculated)
190185.0 Da
IEP (calculated)
6.006
GRAVY (calculated)
0.013
Length
1713 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTEKEQSSGR VNPMAPLSSL VGSIVEKGFP ENKPPPPKPS RLPFPVARHR SHGPHVRSRP QPKVPIVKEE EGDDEEGLIN AENYARLQTM SHEEIVKAQA
0101: ELYEKMDPAL VTILKKRGQD KLKKRKHSVP EVSEECPSDI HSPQGGQQAA VTPSPSSQVA AIPKEASVAS QGFFWDTWTE RVEAVRDLRF SFDGNVLENV
0201: VVPPPETGVN MSAVERDFLR TEGDPGAAGY TIKEAIALTR SVIPGQRCLA LNLLASLLNK ALYKLCQSGI GQQKVQSTDW EAIWAYALGP EPGLVLALRM
0301: ALDDNHASVV LACAKVIQCL LSCSLNENFF DLLENLGPCG KDMFTAPVFR GKPEIDLGLL PGCYWKYSAK PSNIVPFREE IMDDGTEDTD TIQKDVFVAG
0401: QDVAAGLVRM DILPRIYHLL ETEPTAPLEE CLISVTIAIA RHSPKCTTAI LKYPKFVQTI VKRFKLNKRM DVLPSQIFSV RLLKVLARYD KRACMEFVKN
0501: GTFNEVTWHL FQFTSSLDSW VKLGKHKCKL SSDLMVEQLR FLRVCIQSGC CISQYPELFP ALCLWLSCPS FEKLKEKNLI REFASVSREA YLVLEAFAGT
0601: LPSLYSPRNE SDAWDWRYVS PMIDTALSWV TLAPELLEWE RGMESVSLST TASLLWLYSG VIRTVSKVLD KISAHGEEEP LPWLPEFVPK IGLTIIKHKL
0701: LSFSVEKDPS KCSSFMEFLC LLRNNCQDEE LALASVSCLH GLTRTVVSIQ TLIESARSKM ETPQGSESIR DGSVLAKGIL TESLGDLTSV WSSFRDYVAS
0801: EWPIMQSIEI HKRGGLAPGV GLGWGASGGG FWSTRVLLAQ ADADLLSLFL HISQLDSQGS VFLMDKMNSA LAMCLIAGPR DHLLVEKAFD YVLGPHALEH
0901: LACCINSNKR TITSEWKFSE GDYDRMSNVL TSHFKRRWFH PKRKSEPENG SKKVAVGLET IHEEGEMPTE DQRSDSLIVE WAHQRLPLPP QWFLSSISAV
1001: HAGKTSAEDQ EPTELLEVAK AGVFFIAGLE SASGLGTVPS PVSSVPLVWK FHALSTVLLA GMDIIEDKNT RNLYSYLQEL YGHVLDERRQ SSGRETELLL
1101: RFKFDVFESY STFLEMLVEQ YAAVSYGDVL YGRQMSIYLH QCVEPSVRLS AWTALSNARV LELLPSLDKC LGDAQGYLEP AEENEGVLEA YLKSWTCGAL
1201: DRAATRGSVA FTLVLHQFSS LLFCNGDNKD NKEEEGSLRS KIVRTLVRDL SRKQHRQGMM VDLLGYYSKG CADAMEVEEE EESQKREGER RMEVLKEACQ
1301: GNSSLLSELE KLKECVRVES QEDYLQPNLL SANYIFLELW PFPDSPFREE RVAWRYINRD VVPFAVMVAV ECVTVGSTTL FKAASLRGLS FYVFVFYTYV
1401: VAALVLLPLS FIFGRSRRLP SAKAPFFFKI FLLALVGFVS MLSGCKGVEY SNPTLASAIS TLTPAFTFTL AVIFRMERIV LKSSASQAKV IGTIVSISGA
1501: LVIVLYKGPK LLSSASLTSS EATVSLYQDL TSFDSSWIIG GVLLVTQYLL VSLWYILQTQ VMEVYPEKTT VVLLYILCAT IISAPVCMLA EKDLSSFLLK
1601: PGVPLASVMY TGGLVSSVGT VIHTWGLHMK GPVYISLFKP LSIVIAVVMA AIFLGDALHL GSVIGSVVLS CGFYTVIWGK AREDSTRNVA DSEKSPLLVT
1701: HTVEDEASSL RCD
0101: ELYEKMDPAL VTILKKRGQD KLKKRKHSVP EVSEECPSDI HSPQGGQQAA VTPSPSSQVA AIPKEASVAS QGFFWDTWTE RVEAVRDLRF SFDGNVLENV
0201: VVPPPETGVN MSAVERDFLR TEGDPGAAGY TIKEAIALTR SVIPGQRCLA LNLLASLLNK ALYKLCQSGI GQQKVQSTDW EAIWAYALGP EPGLVLALRM
0301: ALDDNHASVV LACAKVIQCL LSCSLNENFF DLLENLGPCG KDMFTAPVFR GKPEIDLGLL PGCYWKYSAK PSNIVPFREE IMDDGTEDTD TIQKDVFVAG
0401: QDVAAGLVRM DILPRIYHLL ETEPTAPLEE CLISVTIAIA RHSPKCTTAI LKYPKFVQTI VKRFKLNKRM DVLPSQIFSV RLLKVLARYD KRACMEFVKN
0501: GTFNEVTWHL FQFTSSLDSW VKLGKHKCKL SSDLMVEQLR FLRVCIQSGC CISQYPELFP ALCLWLSCPS FEKLKEKNLI REFASVSREA YLVLEAFAGT
0601: LPSLYSPRNE SDAWDWRYVS PMIDTALSWV TLAPELLEWE RGMESVSLST TASLLWLYSG VIRTVSKVLD KISAHGEEEP LPWLPEFVPK IGLTIIKHKL
0701: LSFSVEKDPS KCSSFMEFLC LLRNNCQDEE LALASVSCLH GLTRTVVSIQ TLIESARSKM ETPQGSESIR DGSVLAKGIL TESLGDLTSV WSSFRDYVAS
0801: EWPIMQSIEI HKRGGLAPGV GLGWGASGGG FWSTRVLLAQ ADADLLSLFL HISQLDSQGS VFLMDKMNSA LAMCLIAGPR DHLLVEKAFD YVLGPHALEH
0901: LACCINSNKR TITSEWKFSE GDYDRMSNVL TSHFKRRWFH PKRKSEPENG SKKVAVGLET IHEEGEMPTE DQRSDSLIVE WAHQRLPLPP QWFLSSISAV
1001: HAGKTSAEDQ EPTELLEVAK AGVFFIAGLE SASGLGTVPS PVSSVPLVWK FHALSTVLLA GMDIIEDKNT RNLYSYLQEL YGHVLDERRQ SSGRETELLL
1101: RFKFDVFESY STFLEMLVEQ YAAVSYGDVL YGRQMSIYLH QCVEPSVRLS AWTALSNARV LELLPSLDKC LGDAQGYLEP AEENEGVLEA YLKSWTCGAL
1201: DRAATRGSVA FTLVLHQFSS LLFCNGDNKD NKEEEGSLRS KIVRTLVRDL SRKQHRQGMM VDLLGYYSKG CADAMEVEEE EESQKREGER RMEVLKEACQ
1301: GNSSLLSELE KLKECVRVES QEDYLQPNLL SANYIFLELW PFPDSPFREE RVAWRYINRD VVPFAVMVAV ECVTVGSTTL FKAASLRGLS FYVFVFYTYV
1401: VAALVLLPLS FIFGRSRRLP SAKAPFFFKI FLLALVGFVS MLSGCKGVEY SNPTLASAIS TLTPAFTFTL AVIFRMERIV LKSSASQAKV IGTIVSISGA
1501: LVIVLYKGPK LLSSASLTSS EATVSLYQDL TSFDSSWIIG GVLLVTQYLL VSLWYILQTQ VMEVYPEKTT VVLLYILCAT IISAPVCMLA EKDLSSFLLK
1601: PGVPLASVMY TGGLVSSVGT VIHTWGLHMK GPVYISLFKP LSIVIAVVMA AIFLGDALHL GSVIGSVVLS CGFYTVIWGK AREDSTRNVA DSEKSPLLVT
1701: HTVEDEASSL RCD
0001: MEQSSGRVNP EQPNNVLASL VGSIVEKGIS ENKPPSKPLP PRPSLLSFPV ARHRSHGPHL APVGSSIAQP KDYNDDQEEE EAEERFMNAD SIAAFAKPLQ
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
Arabidopsis Description
IYOTranscriptional elongation regulator MINIYO [Source:UniProtKB/Swiss-Prot;Acc:Q8GYU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.