Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44583 | Canola | cytosol, nucleus, plasma membrane, plastid | 89.59 | 89.43 |
| AT4G38440.1 | Thale cress | nucleus | 57.95 | 67.65 |
| VIT_03s0038g03100.t01 | Wine grape | nucleus | 38.71 | 41.32 |
| GSMUA_Achr6P00840_001 | Banana | cytosol | 28.71 | 40.81 |
| KRH70967 | Soybean | nucleus | 37.25 | 39.84 |
| Solyc01g111910.2.1 | Tomato | nucleus | 34.68 | 38.11 |
| KRH75108 | Soybean | golgi, mitochondrion, nucleus, plasma membrane | 36.55 | 37.9 |
| TraesCS7B01G263600.1 | Wheat | nucleus | 32.69 | 37.0 |
| TraesCS7A01G364300.1 | Wheat | nucleus | 32.57 | 36.67 |
| TraesCS7D01G358700.1 | Wheat | nucleus | 32.46 | 36.51 |
| HORVU7Hr1G086420.15 | Barley | cytosol, mitochondrion | 32.16 | 35.64 |
| EER89976 | Sorghum | cytosol | 32.28 | 35.64 |
| Os06t0574400-01 | Rice | endoplasmic reticulum, plasma membrane | 16.2 | 35.47 |
| Zm00001d046366_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 31.52 | 35.02 |
| Os06t0574450-00 | Rice | nucleus | 7.31 | 26.94 |
Protein Annotations
| MapMan:15.3.6.5 | MapMan:24.2.1.5 | GO:A0A078HEN2 | UniProt:A0A078HEN2 | InterPro:ARM-type_fold | EnsemblPlants:CDY36825 |
| ProteinID:CDY36825 | ProteinID:CDY36825.1 | ncoils:Coil | InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00062670001 | PFAM:PF00892 | PFAM:PF08620 |
| PFAM:PF08621 | PANTHER:PTHR21483 | InterPro:RNA_pol_II_AP1_C | InterPro:RNA_pol_II_AP1_N | SUPFAM:SSF103481 | SUPFAM:SSF48371 |
| TMHMM:TMhelix | UniParc:UPI0004EE5E8D | SEG:seg | : | : | : |
Description
BnaC04g32180DBnaC04g32180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEN2]
Coordinates
chrLK032384:-:143304..152675
Molecular Weight (calculated)
189701.0 Da
IEP (calculated)
5.912
GRAVY (calculated)
0.039
Length
1710 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTEKEQSSGR VNPMAPLSSL VGSIVEKGFP ENKPLPPKPS RLPFPVARHR SHGPHVGSRP QPKVPIVQEE EEDDEEEGLM NAENYARLQT MSHEEIVEAQ
0101: AELYEKMKPA LVTFLKKRGQ EKLKKPKHSV PEVSEEGPSD IHSPQAIPKE ASVASASQGF FWDTWTERVE AVRDLRFCFD GNVLENVLVP PPETGVNMSA
0201: GERDFLRTEG DPGAAGYTIK EAIALTRSVI PGQRCLALNL LASLLDKALY KLCQSGIGQQ KVQSTDWEAI WAYALGPEPG LVLALRMALD DNHASVVLAC
0301: AKVIQCLLSC SLNENFFDLM ENMGPCGKDM FTAPVFRGKP EIDLGLLPGC FWKYSAKPSN IVPFREEIMD DGTEDTDTIQ KDVFVAGQDV AAGLVRMDIL
0401: PRIYHLLETE AIAALEECLI SVTIAIARHS PKCTTAILKY PKFVQTIVKR FKLNKRMDVL PSQIYSVRLL KVLARYDKRT CMEFVKNGTF NEVTWHLFQF
0501: TSSLDSWVKL GKHKCKLSSD LMVEQLRFLK VCIQSGCCIS QYPELFPALC LWLSCPSFEK LKENNLIREF ASVSKEAYLV LEAFAGTLPS LYSQNIRGNE
0601: SGAWDWRYVS PMIDTALSWI MLAPELLEWE RGIESVSVST TSLLWLYSGV IRTISKVLDK ISSHGEEEPL PWLPEFVPKI GLTIIKHKLL SFAVAKDPSK
0701: CSSFMEFLCL LRENLQDEEL ALASVSCLHG LTRNIVSIQT LIESARSKME TPQGSESIRD GSVLAKGILT ESLGDLASVW SSFRDYVASE WPIMQSIEIH
0801: KRGGLAPGVG LGWGASGGGF WSTRVLLTQA DAGLLSLFLH ISQLDSQGSV LLMDKMNSAL AMCLIAGPRD HLLVEKALDY VLGPHALEHL ACCINSNKRA
0901: VTSEWKCSEG DYDRISNVLT SHFKRRWLHP KRKSEPENDS KKVAVGLETI HEEGEMPTED QKSDSPIVKW AHQRLPLPPQ WFLSSISAVH VGKTSAEDPE
1001: PTELLEVAKA GVFFIAGLES ASGLGTVPSP VSSVPLVWKF HALSTVLLAG MDIIEDKNTR DLYRYLQELY GQVLDEKRQS SGRETELLLR FKSDVFESYS
1101: TFLEMLVEQY AAVSYGDVLY GRQMSIYLHQ CVEPSVRLSA WTALSNARVL ELLPSLDKCL GEAQGYLEPA EENEGVLEAY LKSWTCGALD RAAARGSVAF
1201: TLVLHQFSSL LFCNGDNKDK EEEGSMRNKV VRTLVRDLSR KQHRQGMMVD LLGYYSKGCA DAMEVEEEEE SQKREAERRM EVLKEACQGN SSLLLELEKL
1301: KECVRVKSQE DYLQPNLMSS SKFSYLLLSA NYIFLELWPF QDSPFLEGRV AWRYINRDVV PFVVMVAVEC VTVGSTTLFK AASLRGLSFY VFVFYTYVVA
1401: ALVLPLSLIF GRSRRLPSAK ALFFFKIFLL ALVGFVSMLS GCKGVEYSNP TLASAISTLT PAFTFTLAVI FRMERIVLKS SASQAKVIGT IVSISGALVI
1501: VLYKGPKLLS SASLTSSEAT VSLYQDLTSF DSSWIIGGVL LVTQYLLVSV WYILQTQVME VYPEKTTVVL LYILSATIIS APVCMLAEKD LTSFLLKPGV
1601: PLASVMYTGG LVSSLGTVIH TWGLHMKGPV YISLFKPLSI VIAVVVAAIF LGDALHLGSV IGSVVLSCGF YTVIWGKARE DSTRNVADSE KSPLLVTHTV
1701: EDEASSLRCD
0101: AELYEKMKPA LVTFLKKRGQ EKLKKPKHSV PEVSEEGPSD IHSPQAIPKE ASVASASQGF FWDTWTERVE AVRDLRFCFD GNVLENVLVP PPETGVNMSA
0201: GERDFLRTEG DPGAAGYTIK EAIALTRSVI PGQRCLALNL LASLLDKALY KLCQSGIGQQ KVQSTDWEAI WAYALGPEPG LVLALRMALD DNHASVVLAC
0301: AKVIQCLLSC SLNENFFDLM ENMGPCGKDM FTAPVFRGKP EIDLGLLPGC FWKYSAKPSN IVPFREEIMD DGTEDTDTIQ KDVFVAGQDV AAGLVRMDIL
0401: PRIYHLLETE AIAALEECLI SVTIAIARHS PKCTTAILKY PKFVQTIVKR FKLNKRMDVL PSQIYSVRLL KVLARYDKRT CMEFVKNGTF NEVTWHLFQF
0501: TSSLDSWVKL GKHKCKLSSD LMVEQLRFLK VCIQSGCCIS QYPELFPALC LWLSCPSFEK LKENNLIREF ASVSKEAYLV LEAFAGTLPS LYSQNIRGNE
0601: SGAWDWRYVS PMIDTALSWI MLAPELLEWE RGIESVSVST TSLLWLYSGV IRTISKVLDK ISSHGEEEPL PWLPEFVPKI GLTIIKHKLL SFAVAKDPSK
0701: CSSFMEFLCL LRENLQDEEL ALASVSCLHG LTRNIVSIQT LIESARSKME TPQGSESIRD GSVLAKGILT ESLGDLASVW SSFRDYVASE WPIMQSIEIH
0801: KRGGLAPGVG LGWGASGGGF WSTRVLLTQA DAGLLSLFLH ISQLDSQGSV LLMDKMNSAL AMCLIAGPRD HLLVEKALDY VLGPHALEHL ACCINSNKRA
0901: VTSEWKCSEG DYDRISNVLT SHFKRRWLHP KRKSEPENDS KKVAVGLETI HEEGEMPTED QKSDSPIVKW AHQRLPLPPQ WFLSSISAVH VGKTSAEDPE
1001: PTELLEVAKA GVFFIAGLES ASGLGTVPSP VSSVPLVWKF HALSTVLLAG MDIIEDKNTR DLYRYLQELY GQVLDEKRQS SGRETELLLR FKSDVFESYS
1101: TFLEMLVEQY AAVSYGDVLY GRQMSIYLHQ CVEPSVRLSA WTALSNARVL ELLPSLDKCL GEAQGYLEPA EENEGVLEAY LKSWTCGALD RAAARGSVAF
1201: TLVLHQFSSL LFCNGDNKDK EEEGSMRNKV VRTLVRDLSR KQHRQGMMVD LLGYYSKGCA DAMEVEEEEE SQKREAERRM EVLKEACQGN SSLLLELEKL
1301: KECVRVKSQE DYLQPNLMSS SKFSYLLLSA NYIFLELWPF QDSPFLEGRV AWRYINRDVV PFVVMVAVEC VTVGSTTLFK AASLRGLSFY VFVFYTYVVA
1401: ALVLPLSLIF GRSRRLPSAK ALFFFKIFLL ALVGFVSMLS GCKGVEYSNP TLASAISTLT PAFTFTLAVI FRMERIVLKS SASQAKVIGT IVSISGALVI
1501: VLYKGPKLLS SASLTSSEAT VSLYQDLTSF DSSWIIGGVL LVTQYLLVSV WYILQTQVME VYPEKTTVVL LYILSATIIS APVCMLAEKD LTSFLLKPGV
1601: PLASVMYTGG LVSSLGTVIH TWGLHMKGPV YISLFKPLSI VIAVVVAAIF LGDALHLGSV IGSVVLSCGF YTVIWGKARE DSTRNVADSE KSPLLVTHTV
1701: EDEASSLRCD
0001: MEQSSGRVNP EQPNNVLASL VGSIVEKGIS ENKPPSKPLP PRPSLLSFPV ARHRSHGPHL APVGSSIAQP KDYNDDQEEE EAEERFMNAD SIAAFAKPLQ
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
Arabidopsis Description
IYOTranscriptional elongation regulator MINIYO [Source:UniProtKB/Swiss-Prot;Acc:Q8GYU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.