Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 1
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046366_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 90.96 | 91.55 |
| TraesCS7D01G358700.1 | Wheat | nucleus | 70.56 | 71.91 |
| TraesCS7B01G263600.1 | Wheat | nucleus | 69.98 | 71.74 |
| TraesCS7A01G364300.1 | Wheat | nucleus | 69.34 | 70.7 |
| Os06t0574400-01 | Rice | endoplasmic reticulum, plasma membrane | 35.44 | 70.29 |
| HORVU7Hr1G086420.15 | Barley | cytosol, mitochondrion | 68.17 | 68.44 |
| Os06t0574450-00 | Rice | nucleus | 20.14 | 67.24 |
| GSMUA_Achr6P00840_001 | Banana | cytosol | 38.15 | 49.13 |
| VIT_03s0038g03100.t01 | Wine grape | nucleus | 41.77 | 40.39 |
| AT4G38440.1 | Thale cress | nucleus | 37.96 | 40.14 |
| KRH70967 | Soybean | nucleus | 40.35 | 39.09 |
| Solyc01g111910.2.1 | Tomato | nucleus | 38.99 | 38.82 |
| KRH75108 | Soybean | golgi, mitochondrion, nucleus, plasma membrane | 40.22 | 37.78 |
| CDY36825 | Canola | cytosol | 35.64 | 32.28 |
| Bra025599.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 35.51 | 32.16 |
| CDY44583 | Canola | cytosol, nucleus, plasma membrane, plastid | 35.31 | 31.93 |
Protein Annotations
| MapMan:15.3.6.5 | EntrezGene:8065033 | InterPro:ARM-type_fold | UniProt:C5Z544 | EnsemblPlants:EER89976 | ProteinID:EER89976 |
| ProteinID:EER89976.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | PFAM:PF08620 | PFAM:PF08621 | PANTHER:PTHR21483 | InterPro:RNA_pol_II_AP1_C |
| InterPro:RNA_pol_II_AP1_N | EnsemblPlantsGene:SORBI_3010G174700 | SUPFAM:SSF48371 | unigene:Sbi.10164 | UniParc:UPI0001A8990E | RefSeq:XP_002438609.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:51040764..51051737
Molecular Weight (calculated)
170952.0 Da
IEP (calculated)
6.598
GRAVY (calculated)
-0.201
Length
1549 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAPTKRRHQ PGGAHPTRRK VVEEPFHPAP PTPAAAAAAA ASASPARLVG AIVEKGFSAA APSSAPRPSV LPFPVARHRS HGPHWGPVAK DAHKDGAADD
0101: DDEMDMDETD YHPVAAAAGP VRRKEKKGMD FSRWREFVGD APPKRRQGKP VQAKKQSDQR IDAGAVASMV GGVAATGRGL EGGAMQLDSG ELEGSAMQLD
0201: SGNTREGPGA VLSVSDVVSK KPMSQAESRD ELVKVGEVRN STSQAESMDL DGRESSMEAE INAENMARLA GMSAGEIAEA QTDIVNKLNP ALVEKLRRRG
0301: REKSGGTKDV GKDKGLENSG PQKTKRATPG DWLTPGEHSG HSWKAWSERV ERIRSCRFTL DGDILGFQFS HEQQDGKKMH SESVAERDFL RTEGDPAAVG
0401: YTIKEAVALT RSMVPGQRVL ALQLLASILN RALQNLHKTD LMDNVKEMNS NEKFDDWQAI WSYALGPEPE LVLSLRMALD DNHDSVVLSC AKVINVMLSC
0501: EFNESYFEFS EKVGNGKDIC TAPVFRSKPD LDGDFLEGGF WKYNTKPSNI LPHYGENDED EGDDKHTIQD DVVVSGQDVA AGFVRMGILP RICFLLEMDP
0601: SPALEDYLVS VLVALARHSP HSADAILNCP RLIQSVTKLL INQGSMEIRS SQIKGVTLLK VLSKYNRQTC LNFVNHGVFQ QALWHWYRKA GTIEDWVRSG
0701: KEKCKLSSAM MVEQLRFWRT CISYGFCIAH FADFFPVLCL WLSPPEFKKL NEHNVLVEFS SIARESYLVL AALAQRLPLL HSVEQLANQD RGVSASYIET
0801: CSWSHVVPMV DLALSWLHLN DIPYVCSLIS GQNRNTKHMV DASYLILVIA SVLGMLNSIL ERISPNVTPE DKSYSLPWIP DFVPKIGLGI ISNGFFSCLG
0901: TVAVRNAEHQ SFCSASLVQG LCYMRCHGNV DVSLSSISCL QRLVQLSWSV DRVIQGAKKS CSECFNESGT GVAGKLLGEG ISSLWHNDLL HLLTSLLPMI
1001: SSQWSISQNI EMFGRGGPAP GVGFGWGACG GGFWSLKCLL AQLDSQLVVE LMKCFSSVQG SPVILDEGVK SDNVTNTVVT ASNWISSSLG LSLIAGPGQI
1101: YMLEKAFDMI FEPSILKYLK SSIHKFASDM VLLKPFEWDI NDDEYLLFSS VLNSHFRSRW LAVKKKKHSD KYTGNNSSTK ISKTPETLET IQEETELTEA
1201: VNQPCNTLVV EWAHQRLPLP IQWILSAVCC IDDPKGTLST SANYILDVSR AGLIFLLGLE AISATPCLHA PLIWKIHALS VSIRSSMHLL QEDRSRDIFC
1301: ALQELYGQHL NRLCQKFCKS KSVEEVKGVV VATSEEAMEI SNHEILRFQE KIHGSYTTFV ESLVDQFAAV SYGDFVFGRQ VAIYLHRKVE PAVRLAAWNA
1401: LSNAYVLELL PPLDKCIGNA QGYLEPLEDD ENFLESYAKS WTSGVLDKAL QRDSMAFTLV KHHLSGFVFQ SSDSGKTLRN KLVKSLIRCY AQKRHHEVML
1501: KSFVLQGIAQ DSKSSGNELD RRFEILKDAC EMNSSLLGEV QRLRACLGQ
0101: DDEMDMDETD YHPVAAAAGP VRRKEKKGMD FSRWREFVGD APPKRRQGKP VQAKKQSDQR IDAGAVASMV GGVAATGRGL EGGAMQLDSG ELEGSAMQLD
0201: SGNTREGPGA VLSVSDVVSK KPMSQAESRD ELVKVGEVRN STSQAESMDL DGRESSMEAE INAENMARLA GMSAGEIAEA QTDIVNKLNP ALVEKLRRRG
0301: REKSGGTKDV GKDKGLENSG PQKTKRATPG DWLTPGEHSG HSWKAWSERV ERIRSCRFTL DGDILGFQFS HEQQDGKKMH SESVAERDFL RTEGDPAAVG
0401: YTIKEAVALT RSMVPGQRVL ALQLLASILN RALQNLHKTD LMDNVKEMNS NEKFDDWQAI WSYALGPEPE LVLSLRMALD DNHDSVVLSC AKVINVMLSC
0501: EFNESYFEFS EKVGNGKDIC TAPVFRSKPD LDGDFLEGGF WKYNTKPSNI LPHYGENDED EGDDKHTIQD DVVVSGQDVA AGFVRMGILP RICFLLEMDP
0601: SPALEDYLVS VLVALARHSP HSADAILNCP RLIQSVTKLL INQGSMEIRS SQIKGVTLLK VLSKYNRQTC LNFVNHGVFQ QALWHWYRKA GTIEDWVRSG
0701: KEKCKLSSAM MVEQLRFWRT CISYGFCIAH FADFFPVLCL WLSPPEFKKL NEHNVLVEFS SIARESYLVL AALAQRLPLL HSVEQLANQD RGVSASYIET
0801: CSWSHVVPMV DLALSWLHLN DIPYVCSLIS GQNRNTKHMV DASYLILVIA SVLGMLNSIL ERISPNVTPE DKSYSLPWIP DFVPKIGLGI ISNGFFSCLG
0901: TVAVRNAEHQ SFCSASLVQG LCYMRCHGNV DVSLSSISCL QRLVQLSWSV DRVIQGAKKS CSECFNESGT GVAGKLLGEG ISSLWHNDLL HLLTSLLPMI
1001: SSQWSISQNI EMFGRGGPAP GVGFGWGACG GGFWSLKCLL AQLDSQLVVE LMKCFSSVQG SPVILDEGVK SDNVTNTVVT ASNWISSSLG LSLIAGPGQI
1101: YMLEKAFDMI FEPSILKYLK SSIHKFASDM VLLKPFEWDI NDDEYLLFSS VLNSHFRSRW LAVKKKKHSD KYTGNNSSTK ISKTPETLET IQEETELTEA
1201: VNQPCNTLVV EWAHQRLPLP IQWILSAVCC IDDPKGTLST SANYILDVSR AGLIFLLGLE AISATPCLHA PLIWKIHALS VSIRSSMHLL QEDRSRDIFC
1301: ALQELYGQHL NRLCQKFCKS KSVEEVKGVV VATSEEAMEI SNHEILRFQE KIHGSYTTFV ESLVDQFAAV SYGDFVFGRQ VAIYLHRKVE PAVRLAAWNA
1401: LSNAYVLELL PPLDKCIGNA QGYLEPLEDD ENFLESYAKS WTSGVLDKAL QRDSMAFTLV KHHLSGFVFQ SSDSGKTLRN KLVKSLIRCY AQKRHHEVML
1501: KSFVLQGIAQ DSKSSGNELD RRFEILKDAC EMNSSLLGEV QRLRACLGQ
0001: MEQSSGRVNP EQPNNVLASL VGSIVEKGIS ENKPPSKPLP PRPSLLSFPV ARHRSHGPHL APVGSSIAQP KDYNDDQEEE EAEERFMNAD SIAAFAKPLQ
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
Arabidopsis Description
IYOTranscriptional elongation regulator MINIYO [Source:UniProtKB/Swiss-Prot;Acc:Q8GYU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.