Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0038g03100.t01 | Wine grape | nucleus | 48.91 | 47.5 |
| GSMUA_Achr6P00840_001 | Banana | cytosol | 34.19 | 44.22 |
| AT4G38440.1 | Thale cress | nucleus | 41.13 | 43.69 |
| KRH70967 | Soybean | nucleus | 44.34 | 43.15 |
| KRH75108 | Soybean | golgi, mitochondrion, nucleus, plasma membrane | 44.54 | 42.03 |
| TraesCS7A01G364300.1 | Wheat | nucleus | 38.62 | 39.57 |
| TraesCS7B01G263600.1 | Wheat | nucleus | 38.3 | 39.44 |
| TraesCS7D01G358700.1 | Wheat | nucleus | 38.24 | 39.14 |
| EER89976 | Sorghum | cytosol | 38.82 | 38.99 |
| HORVU7Hr1G086420.15 | Barley | cytosol, mitochondrion | 38.3 | 38.63 |
| Os06t0574400-01 | Rice | endoplasmic reticulum, plasma membrane | 19.34 | 38.54 |
| Zm00001d046366_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 38.11 | 38.53 |
| CDY36825 | Canola | cytosol | 38.11 | 34.68 |
| Bra025599.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 37.79 | 34.39 |
| CDY44583 | Canola | cytosol, nucleus, plasma membrane, plastid | 37.72 | 34.27 |
| Os06t0574450-00 | Rice | nucleus | 9.64 | 32.33 |
Protein Annotations
| MapMan:15.3.6.5 | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | UniProt:K4B453 | PFAM:PF08620 | PFAM:PF08621 | PANTHER:PTHR21483 |
| InterPro:RNA_pol_II_AP1_C | InterPro:RNA_pol_II_AP1_N | SUPFAM:SSF48371 | EnsemblPlantsGene:Solyc01g111910.2 | EnsemblPlants:Solyc01g111910.2.1 | UniParc:UPI0002767AB3 |
| SEG:seg | : | : | : | : | : |
Description
Transcriptional elongation regulator MINIYO [Source:Projected from Arabidopsis thaliana (AT4G38440) UniProtKB/Swiss-Prot;Acc:Q8GYU3]
Coordinates
chr1:-:98068546..98079075
Molecular Weight (calculated)
174811.0 Da
IEP (calculated)
6.109
GRAVY (calculated)
-0.296
Length
1556 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNNVDSKKRT TQKIFGTVIN EDDASHLVGG IVEKGFSEQP LKPPTTWSSA PRPTVLPFPV ARHRAHGPHW TPKVGIVRGY NNHDKEEDFT GMDQIGVFAK
0101: PMERKENKGL DFSRWREIVA SDNSSVPSKR EESARKLMST SKERKDVAEI SRNKSNLDER TPDKYGKGAV LSVEDVAKSQ DISMEDEYMV QEQEEDMSMN
0201: IEKGGMEQSA YHSVLQEQRC GNGITEQEEE IIEDMHPTLQ VKSQKHNIYA NKTDATFDSQ EVERRQNASS LESQIDAENK AQLARMSAEE IAEAQSELMA
0301: KFSPAMLAAL KRKGQEKLKR GKSSKSGSHH SGEKGNLLDQ MNNATSQGTL KNVKVDTPNL SASTSVWDDW SKRVESVREL RFSLDGNIVK SEFDVSKSGN
0401: TSSYAEQNLS ERDYLRTEGD PGAAGYTIKE AVALARSLVP GQRTFAFHLI ASVLDRAMHN IQQNQLGCLL RSEDRDGLTD WEAIWAFTLG PEPELALLLR
0501: MYLDDNHSSV VLACARAIQC ALTFEINEEF FEIVERIPTL QREAPTAPVF RSRPEIEDGF LHGCFWKYNA KPSNILPFAR DYLDNDENEH TIQDDVVVAG
0601: QDIVAGLIRM GILQRIQYLL ETEPSTALEE CLISILIAIA RHSPTCAAAI MNCQQLVETI INRFTSKEQM EISTSKIKSV TLLKLLARFD KKNCLEFVKT
0701: GIVQKMTWHL YRYTSFVHWV KSGKEARMFS SALLVEQLRL WKVCVQHGYC VSFFDDLFPA LCIWLNVPAF RKLIENSVLS EYTAIAKEAY LVLGALTRRL
0801: PTFYSHMQHL DRGTTKEAES WCWAQVGPMI DSALESIRIK EIPLLSHLFE GENDEKLNGD MQDSAVPPLL WLISSIMDML SAVLEAVIPE DNAELCHGTL
0901: PWLPDFVPKI GLAILKNGLM SFSSISSTSH DDASGSSSFL ERLCYLRKTN QQETSIASNS CLQGLLRVAW CVDKLILLAN NEPRNSLPYQ GSTREEKALA
1001: AGILHSSLPE LRGLMTSVME SNSSEWRHMQ SIETFGRGGP APGIGVGWGA PGGGFWSKNI LSAQVAARLF IYLLDVLPIE SVEDQFTAEG MNSIIQKINS
1101: VMGACLLLGP MDSSAVDKLL DFLFQVPTLK YIDFSIRHFL NLNQGFQSFK LVYQEEDYLL LSDVLASHFK KKWLCVKQKR KSAAGNEQAF HKNSKRRSVL
1201: LDTIPEENSE SNPASQEPKC LVAEWAHQRL PLPLHWFLSP LSVLCSTSHE SLDFLKVAKG GLFFLLGIEL MSTSLPAELQ TPVRNVPIVW KLHALSATLL
1301: SGMSIFEEDN SRDLYKALQD IYGQLLDREE KVNAKSLKFK TDIHENYSTF IDNLVEQFAA VSYGDMIFGR QVGVYLHQFV EAPVRLAAWN ALSNACALEL
1401: LPPLEKCIAA TNGYFEPVED DERMLEAYCK SWVSGALDKA ARRGSASFTL ALHHLSSFIF QSCSGNMIPL RNKLVKSLLR DYSRKKQHEV LFINLLEYQR
1501: PDTRPEPFHK GCMPLQSCNV VNRLQILKEA CEGNSSLLNE VEKLNSVITR KQHVES
0101: PMERKENKGL DFSRWREIVA SDNSSVPSKR EESARKLMST SKERKDVAEI SRNKSNLDER TPDKYGKGAV LSVEDVAKSQ DISMEDEYMV QEQEEDMSMN
0201: IEKGGMEQSA YHSVLQEQRC GNGITEQEEE IIEDMHPTLQ VKSQKHNIYA NKTDATFDSQ EVERRQNASS LESQIDAENK AQLARMSAEE IAEAQSELMA
0301: KFSPAMLAAL KRKGQEKLKR GKSSKSGSHH SGEKGNLLDQ MNNATSQGTL KNVKVDTPNL SASTSVWDDW SKRVESVREL RFSLDGNIVK SEFDVSKSGN
0401: TSSYAEQNLS ERDYLRTEGD PGAAGYTIKE AVALARSLVP GQRTFAFHLI ASVLDRAMHN IQQNQLGCLL RSEDRDGLTD WEAIWAFTLG PEPELALLLR
0501: MYLDDNHSSV VLACARAIQC ALTFEINEEF FEIVERIPTL QREAPTAPVF RSRPEIEDGF LHGCFWKYNA KPSNILPFAR DYLDNDENEH TIQDDVVVAG
0601: QDIVAGLIRM GILQRIQYLL ETEPSTALEE CLISILIAIA RHSPTCAAAI MNCQQLVETI INRFTSKEQM EISTSKIKSV TLLKLLARFD KKNCLEFVKT
0701: GIVQKMTWHL YRYTSFVHWV KSGKEARMFS SALLVEQLRL WKVCVQHGYC VSFFDDLFPA LCIWLNVPAF RKLIENSVLS EYTAIAKEAY LVLGALTRRL
0801: PTFYSHMQHL DRGTTKEAES WCWAQVGPMI DSALESIRIK EIPLLSHLFE GENDEKLNGD MQDSAVPPLL WLISSIMDML SAVLEAVIPE DNAELCHGTL
0901: PWLPDFVPKI GLAILKNGLM SFSSISSTSH DDASGSSSFL ERLCYLRKTN QQETSIASNS CLQGLLRVAW CVDKLILLAN NEPRNSLPYQ GSTREEKALA
1001: AGILHSSLPE LRGLMTSVME SNSSEWRHMQ SIETFGRGGP APGIGVGWGA PGGGFWSKNI LSAQVAARLF IYLLDVLPIE SVEDQFTAEG MNSIIQKINS
1101: VMGACLLLGP MDSSAVDKLL DFLFQVPTLK YIDFSIRHFL NLNQGFQSFK LVYQEEDYLL LSDVLASHFK KKWLCVKQKR KSAAGNEQAF HKNSKRRSVL
1201: LDTIPEENSE SNPASQEPKC LVAEWAHQRL PLPLHWFLSP LSVLCSTSHE SLDFLKVAKG GLFFLLGIEL MSTSLPAELQ TPVRNVPIVW KLHALSATLL
1301: SGMSIFEEDN SRDLYKALQD IYGQLLDREE KVNAKSLKFK TDIHENYSTF IDNLVEQFAA VSYGDMIFGR QVGVYLHQFV EAPVRLAAWN ALSNACALEL
1401: LPPLEKCIAA TNGYFEPVED DERMLEAYCK SWVSGALDKA ARRGSASFTL ALHHLSSFIF QSCSGNMIPL RNKLVKSLLR DYSRKKQHEV LFINLLEYQR
1501: PDTRPEPFHK GCMPLQSCNV VNRLQILKEA CEGNSSLLNE VEKLNSVITR KQHVES
0001: MEQSSGRVNP EQPNNVLASL VGSIVEKGIS ENKPPSKPLP PRPSLLSFPV ARHRSHGPHL APVGSSIAQP KDYNDDQEEE EAEERFMNAD SIAAFAKPLQ
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
Arabidopsis Description
IYOTranscriptional elongation regulator MINIYO [Source:UniProtKB/Swiss-Prot;Acc:Q8GYU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.