Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0574400-01 | Rice | endoplasmic reticulum, plasma membrane | 29.09 | 44.81 |
| TraesCS7A01G364300.1 | Wheat | nucleus | 49.04 | 38.84 |
| TraesCS7B01G263600.1 | Wheat | nucleus | 48.63 | 38.72 |
| TraesCS7D01G358700.1 | Wheat | nucleus | 48.88 | 38.68 |
| EER89976 | Sorghum | cytosol | 49.13 | 38.15 |
| HORVU7Hr1G086420.15 | Barley | cytosol, mitochondrion | 48.88 | 38.11 |
| Zm00001d046366_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 48.63 | 38.01 |
| VIT_03s0038g03100.t01 | Wine grape | nucleus | 48.46 | 36.39 |
| Solyc01g111910.2.1 | Tomato | nucleus | 44.22 | 34.19 |
| AT4G38440.1 | Thale cress | nucleus | 41.31 | 33.92 |
| KRH70967 | Soybean | nucleus | 44.72 | 33.65 |
| KRH75108 | Soybean | golgi, mitochondrion, nucleus, plasma membrane | 45.97 | 33.54 |
| CDY44583 | Canola | cytosol, nucleus, plasma membrane, plastid | 40.98 | 28.78 |
| CDY36825 | Canola | cytosol | 40.81 | 28.71 |
| Bra025599.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 40.65 | 28.6 |
| Os06t0574450-00 | Rice | nucleus | 5.74 | 14.87 |
| GSMUA_AchrUn_... | Banana | nucleus | 1.08 | 3.64 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P00840_001 | EnsemblPlants:GSMUA_Achr6T00840_001 | EnsemblPlantsGene:GSMUA_Achr6G00840_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0030154 |
| InterPro:ARM-type_fold | InterPro:RNA_pol_II_AP1_C | PANTHER:PTHR21483 | PFAM:PF08620 | SEG:seg | SUPFAM:SSF48371 |
| UniParc:UPI000294F3A6 | UniProt:M0T332 | MapMan:15.3.6.5 | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G00840_001]
Coordinates
chr6:+:573662..583866
Molecular Weight (calculated)
135412.0 Da
IEP (calculated)
6.353
GRAVY (calculated)
0.037
Length
1203 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLFLDFNQGK TKKGIGLTAQ SRPDNGLGPC GKLDFFSLFG SVARSASEIG HSMFQSMDGA VYNVAERDLL RTEGDPAALG YTIHEAVALT RSMIPGQRAI
0101: ALKLLASVLS KALHNLQHMD NCSQVRKTNP VDDFVDWQAV WAFVLGPEPQ MALSLRIALD DNHDSVVMAC CKTIQSILSF DINEFFFDTA EKVTTSKKNT
0201: FMAPVFRSRP DADGGFLHGG YWKYNTKPSN ILLTNEQNSE DDENEEQHTI QDDVVVAGQD VASGLVRMGV LPRICYLLEM DPLPALEESL VSIVVSVARH
0301: SPTCADAVMK CPNLIQTVVK IFTKQGVERY PSQIKAVLLL KVLSQANKRV CLDFVKHGVF QQAMWHWYKN VFTLESWVKS GREYCKLTSA LMVEQLRLWR
0401: VFIQYGFCIT YFVDFFPAMC LWLNPPTFTK IIGNDILGEF TSITREAYLV LEALAQRLPN LHSMDQVNKQ TIDFSIYAAE FWSWNHVSPM IDLAISWLSL
0501: RDIPYISSLI ADPKKSMSHV EVAPMASLLW VISAVLHMLC SILDRAFAFP CTHKNVDKQN SSLPWLRHFV LKIGLQIIKN GFLDILCSSK YEFEDFYTEN
0601: GSLARVLCLL RQQKNVDVSL SSVSCLRGLV QISQLVDEHV RRAKTINNGQ SFTEGMLGLP EKTLEEGIIR SAQNDLLQVL TLFIDVLSSE KQVLQSVEMF
0701: GRGGPAPGIG FGWGSCGGGF WSLNVLLAQI DSQLILSLYN IIPVVSENDP IQVESIRPDN AITLQRINSM LEICLLAGPG DEATLDKALD YLFHLPVLRY
0801: LGFCVNHFLH HMKFSNASDW QYGEEDYIFF SEILKLYYRE RWLTAKRKTA TQVHNDDIHK RSHALETIHE EIEPHAAVSR DHSSNGLLVE WAYQRLPLPM
0901: HWFLSAVCIM GDLKKMATCS PADVAKSGLF FLLGLEVMSS FLCSTSRDSL ISGIPLVWKL HALSMALHVN MDVLGEERSG NVFKTLQDMY GQHIDQLKFL
1001: NFQTTIHESY NTFVEDIVEQ FCAMSYGDII YGRQVAVYLH RTVEASVRLA MWNALFNIHA LELLPPIGKC IAGAEGYLEP VEDKEEILEA YAKSWTSGCL
1101: EKASTRESVS FTLAVHHLSC FIFNTSASEK LAMRNKLAKS LLRSYSLKPH QETMLLTLLR YGLMFSQEPT YKTEVARRLV VLKEACDGNS SLLVMVEKLE
1201: SLG
0101: ALKLLASVLS KALHNLQHMD NCSQVRKTNP VDDFVDWQAV WAFVLGPEPQ MALSLRIALD DNHDSVVMAC CKTIQSILSF DINEFFFDTA EKVTTSKKNT
0201: FMAPVFRSRP DADGGFLHGG YWKYNTKPSN ILLTNEQNSE DDENEEQHTI QDDVVVAGQD VASGLVRMGV LPRICYLLEM DPLPALEESL VSIVVSVARH
0301: SPTCADAVMK CPNLIQTVVK IFTKQGVERY PSQIKAVLLL KVLSQANKRV CLDFVKHGVF QQAMWHWYKN VFTLESWVKS GREYCKLTSA LMVEQLRLWR
0401: VFIQYGFCIT YFVDFFPAMC LWLNPPTFTK IIGNDILGEF TSITREAYLV LEALAQRLPN LHSMDQVNKQ TIDFSIYAAE FWSWNHVSPM IDLAISWLSL
0501: RDIPYISSLI ADPKKSMSHV EVAPMASLLW VISAVLHMLC SILDRAFAFP CTHKNVDKQN SSLPWLRHFV LKIGLQIIKN GFLDILCSSK YEFEDFYTEN
0601: GSLARVLCLL RQQKNVDVSL SSVSCLRGLV QISQLVDEHV RRAKTINNGQ SFTEGMLGLP EKTLEEGIIR SAQNDLLQVL TLFIDVLSSE KQVLQSVEMF
0701: GRGGPAPGIG FGWGSCGGGF WSLNVLLAQI DSQLILSLYN IIPVVSENDP IQVESIRPDN AITLQRINSM LEICLLAGPG DEATLDKALD YLFHLPVLRY
0801: LGFCVNHFLH HMKFSNASDW QYGEEDYIFF SEILKLYYRE RWLTAKRKTA TQVHNDDIHK RSHALETIHE EIEPHAAVSR DHSSNGLLVE WAYQRLPLPM
0901: HWFLSAVCIM GDLKKMATCS PADVAKSGLF FLLGLEVMSS FLCSTSRDSL ISGIPLVWKL HALSMALHVN MDVLGEERSG NVFKTLQDMY GQHIDQLKFL
1001: NFQTTIHESY NTFVEDIVEQ FCAMSYGDII YGRQVAVYLH RTVEASVRLA MWNALFNIHA LELLPPIGKC IAGAEGYLEP VEDKEEILEA YAKSWTSGCL
1101: EKASTRESVS FTLAVHHLSC FIFNTSASEK LAMRNKLAKS LLRSYSLKPH QETMLLTLLR YGLMFSQEPT YKTEVARRLV VLKEACDGNS SLLVMVEKLE
1201: SLG
0001: MEQSSGRVNP EQPNNVLASL VGSIVEKGIS ENKPPSKPLP PRPSLLSFPV ARHRSHGPHL APVGSSIAQP KDYNDDQEEE EAEERFMNAD SIAAFAKPLQ
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
Arabidopsis Description
IYOTranscriptional elongation regulator MINIYO [Source:UniProtKB/Swiss-Prot;Acc:Q8GYU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.