Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75108 | Soybean | golgi, mitochondrion, nucleus, plasma membrane | 86.68 | 84.05 |
| VIT_03s0038g03100.t01 | Wine grape | nucleus | 50.91 | 50.81 |
| AT4G38440.1 | Thale cress | nucleus | 42.34 | 46.21 |
| GSMUA_Achr6P00840_001 | Banana | cytosol | 33.65 | 44.72 |
| Solyc01g111910.2.1 | Tomato | nucleus | 43.15 | 44.34 |
| TraesCS7B01G263600.1 | Wheat | nucleus | 38.77 | 41.03 |
| TraesCS7D01G358700.1 | Wheat | nucleus | 38.77 | 40.79 |
| TraesCS7A01G364300.1 | Wheat | nucleus | 38.65 | 40.68 |
| EER89976 | Sorghum | cytosol | 39.09 | 40.35 |
| Zm00001d046366_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 38.71 | 40.22 |
| HORVU7Hr1G086420.15 | Barley | cytosol, mitochondrion | 38.77 | 40.18 |
| Os06t0574400-01 | Rice | endoplasmic reticulum, plasma membrane | 19.14 | 39.18 |
| CDY44583 | Canola | cytosol, nucleus, plasma membrane, plastid | 40.02 | 37.36 |
| CDY36825 | Canola | cytosol | 39.84 | 37.25 |
| Bra025599.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 39.77 | 37.19 |
| Os06t0574450-00 | Rice | nucleus | 9.69 | 33.41 |
Protein Annotations
| EntrezGene:100819615 | MapMan:15.3.6.5 | EMBL:ACUP02000834 | InterPro:ARM-type_fold | EnsemblPlantsGene:GLYMA_02G121200 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:K7K7W3 |
| ProteinID:KRH70964.1 | ProteinID:KRH70965.1 | ProteinID:KRH70966.1 | EnsemblPlants:KRH70967 | ProteinID:KRH70967 | ProteinID:KRH70967.1 |
| PFAM:PF08620 | PFAM:PF08621 | PANTHER:PTHR21483 | InterPro:RNA_pol_II_AP1_C | InterPro:RNA_pol_II_AP1_N | SUPFAM:SSF48371 |
| UniParc:UPI000294F368 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:11984087..11999723
Molecular Weight (calculated)
179398.0 Da
IEP (calculated)
5.792
GRAVY (calculated)
-0.295
Length
1599 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDNQKKGKGG DQPKKLAKVL NTSSLQINEK DAFQLVGSIV EKGISDSHNN PTTTPPFHFF PKPTVLPFPV ARHRSHGPHW RPLSSRGDDD GEDDDSDNNV
0101: KDEEDKNLQE FEKVSAFAKP VQRRRKKGLD FRKWKEITRD DSSSFGKESE KDVSSFSQTT GKKKNEKGSK STYKKTSSLD DNVISPMKVD TKPLLDNSDG
0201: GFINSTTTME VDTLNKVDHE EKVKHARIYD DKEQNESVPG LDQISSDWMP DYNFGSLDVQ RPGQTDLNSS MLSCSSSNSI RSEQKSVSLD SEIDAENRAR
0301: IQQMSAEEIA EAQTEIMEKM SPALLKLLQK RGQNKLKKLK LEVDIGSESV NGHAQSPQDA KHLHTEDGIA QTVIVPPSKE KLDDEKISTK TSTTASSSAW
0401: NAWSNRVEAV RELRFSLVGD VVDSERVSVY DNANERDYLR TEGDPGAAGY TIKEAVALTR SVIPGQRTLA LHLLSSVLDK ALHYICEDRT GHMTKIENKV
0501: DKSVDWEAVW AFALGPEPEL VLSLRICLDD NHNSVVLACA KVVQCVLSYD ANENYCNISE KIATCDMDIC TAPVFRSRPD INDGFLQGGF WKYSAKPSNI
0601: LPFSDDSMDN ETEGKHTIQD DIVVAGQDFT VGLVRMGILP RLRYLLETDP TTALEECIIS VLIAIARHSP TCANAVLKCE RLVQTIANRY TAENFEIRSS
0701: MIRSVRLLKV LARSDRKSCL EFIKKGYFQA MTWNLYQSPS SIDHWLRLGK EKCKLTSALI VEQMRFWRVC IQYGYCVSYF SEMFPALCFW LNPPSFEKLV
0801: ENNVLDESTS ISREAYLVLE SLAGKLPNLF SKQCLNNQLP ESAGDTEVWS WNYVGPMVDL AIKWIASRND PEVSKFFEGQ EEGRYDFTFR DLSATPLLWV
0901: YAAVTHMLFR VLERMTWGDT IETEGHVPWL PEFVPKIGLE VIKYWFLGFS ASFGAKCGRD SKGESFMKEL VYLRQKDDIE MSLASTCCLN GMVKIITAID
1001: NLIQSAKASI CSLPCQEQSL SKEGKVLEDG IVKGCWVELR YMLDVFMFSV SSGWHRIQSI ESFGRGGLVP GAGIGWGASG GGFWSATVLL AQADARFLVY
1101: LLEIFENASK GVVTEETTFT IQRVNAGLGL CLTAGPRDKV VVEKTLDFLF HVSVLKHLDL CIQSLLLNRR GKTFGWQHEE EDYMHLSRML SSHFRSRWLS
1201: VKVKSKSVDG SSSSGIKTSP KVGACLETIY EDSDTSSVTT PCCNSIMIEW AHQKLPLPVH FYLSPISTIF HSKRAGTKIV DDVLHDPSNL LEVAKCGLFF
1301: VLGVEAMSIF HGTDIPSPVQ QVSLTWKLHS LSVNFLVGME ILEQDWSRDI FEALQDLYGE LLDNARLNQS KEVISDDKKH LEFLRFQTEI HESYSTFLEE
1401: LVEQFSAVSY GDVIFGRQVS LYLHRCVETS IRLAAWNTLS NSRVLELLPP LEKCFSGAEG YLEPAEDNEA ILEAYTNLWV SDALDRAAIR GSVAYTLVVH
1501: HLSSFIFHAC PTDKLLLRNR LARSLLRDYA GKQQHEGMLL NLIHHNKPPP SVMGEELNGI LSEKSWLESR LKVLVEACEG NSSILTVVDK LKAVVKNSS
0101: KDEEDKNLQE FEKVSAFAKP VQRRRKKGLD FRKWKEITRD DSSSFGKESE KDVSSFSQTT GKKKNEKGSK STYKKTSSLD DNVISPMKVD TKPLLDNSDG
0201: GFINSTTTME VDTLNKVDHE EKVKHARIYD DKEQNESVPG LDQISSDWMP DYNFGSLDVQ RPGQTDLNSS MLSCSSSNSI RSEQKSVSLD SEIDAENRAR
0301: IQQMSAEEIA EAQTEIMEKM SPALLKLLQK RGQNKLKKLK LEVDIGSESV NGHAQSPQDA KHLHTEDGIA QTVIVPPSKE KLDDEKISTK TSTTASSSAW
0401: NAWSNRVEAV RELRFSLVGD VVDSERVSVY DNANERDYLR TEGDPGAAGY TIKEAVALTR SVIPGQRTLA LHLLSSVLDK ALHYICEDRT GHMTKIENKV
0501: DKSVDWEAVW AFALGPEPEL VLSLRICLDD NHNSVVLACA KVVQCVLSYD ANENYCNISE KIATCDMDIC TAPVFRSRPD INDGFLQGGF WKYSAKPSNI
0601: LPFSDDSMDN ETEGKHTIQD DIVVAGQDFT VGLVRMGILP RLRYLLETDP TTALEECIIS VLIAIARHSP TCANAVLKCE RLVQTIANRY TAENFEIRSS
0701: MIRSVRLLKV LARSDRKSCL EFIKKGYFQA MTWNLYQSPS SIDHWLRLGK EKCKLTSALI VEQMRFWRVC IQYGYCVSYF SEMFPALCFW LNPPSFEKLV
0801: ENNVLDESTS ISREAYLVLE SLAGKLPNLF SKQCLNNQLP ESAGDTEVWS WNYVGPMVDL AIKWIASRND PEVSKFFEGQ EEGRYDFTFR DLSATPLLWV
0901: YAAVTHMLFR VLERMTWGDT IETEGHVPWL PEFVPKIGLE VIKYWFLGFS ASFGAKCGRD SKGESFMKEL VYLRQKDDIE MSLASTCCLN GMVKIITAID
1001: NLIQSAKASI CSLPCQEQSL SKEGKVLEDG IVKGCWVELR YMLDVFMFSV SSGWHRIQSI ESFGRGGLVP GAGIGWGASG GGFWSATVLL AQADARFLVY
1101: LLEIFENASK GVVTEETTFT IQRVNAGLGL CLTAGPRDKV VVEKTLDFLF HVSVLKHLDL CIQSLLLNRR GKTFGWQHEE EDYMHLSRML SSHFRSRWLS
1201: VKVKSKSVDG SSSSGIKTSP KVGACLETIY EDSDTSSVTT PCCNSIMIEW AHQKLPLPVH FYLSPISTIF HSKRAGTKIV DDVLHDPSNL LEVAKCGLFF
1301: VLGVEAMSIF HGTDIPSPVQ QVSLTWKLHS LSVNFLVGME ILEQDWSRDI FEALQDLYGE LLDNARLNQS KEVISDDKKH LEFLRFQTEI HESYSTFLEE
1401: LVEQFSAVSY GDVIFGRQVS LYLHRCVETS IRLAAWNTLS NSRVLELLPP LEKCFSGAEG YLEPAEDNEA ILEAYTNLWV SDALDRAAIR GSVAYTLVVH
1501: HLSSFIFHAC PTDKLLLRNR LARSLLRDYA GKQQHEGMLL NLIHHNKPPP SVMGEELNGI LSEKSWLESR LKVLVEACEG NSSILTVVDK LKAVVKNSS
0001: MEQSSGRVNP EQPNNVLASL VGSIVEKGIS ENKPPSKPLP PRPSLLSFPV ARHRSHGPHL APVGSSIAQP KDYNDDQEEE EAEERFMNAD SIAAFAKPLQ
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
Arabidopsis Description
IYOTranscriptional elongation regulator MINIYO [Source:UniProtKB/Swiss-Prot;Acc:Q8GYU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.