Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89976 | Sorghum | cytosol | 91.55 | 90.96 |
| TraesCS7B01G263600.1 | Wheat | nucleus | 69.14 | 70.42 |
| TraesCS7D01G358700.1 | Wheat | nucleus | 69.4 | 70.26 |
| TraesCS7A01G364300.1 | Wheat | nucleus | 68.49 | 69.39 |
| Os06t0574400-01 | Rice | endoplasmic reticulum, plasma membrane | 34.76 | 68.5 |
| HORVU7Hr1G086420.15 | Barley | cytosol, mitochondrion | 67.58 | 67.4 |
| Os06t0574450-00 | Rice | nucleus | 19.88 | 65.95 |
| GSMUA_Achr6P00840_001 | Banana | cytosol | 38.01 | 48.63 |
| VIT_03s0038g03100.t01 | Wine grape | nucleus | 41.26 | 39.64 |
| AT4G38440.1 | Thale cress | nucleus | 37.43 | 39.32 |
| KRH70967 | Soybean | nucleus | 40.22 | 38.71 |
| Solyc01g111910.2.1 | Tomato | nucleus | 38.53 | 38.11 |
| KRH75108 | Soybean | golgi, mitochondrion, nucleus, plasma membrane | 39.96 | 37.3 |
| Bra025599.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 35.02 | 31.52 |
| CDY36825 | Canola | cytosol | 35.02 | 31.52 |
| CDY44583 | Canola | cytosol, nucleus, plasma membrane, plastid | 34.89 | 31.35 |
Protein Annotations
| EntrezGene:103638625 | MapMan:15.3.6.5 | UniProt:A0A1D6P290 | ProteinID:AQL04131.1 | InterPro:ARM-type_fold | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0030154 | PFAM:PF08620 | PFAM:PF08621 | PANTHER:PTHR21483 | InterPro:RNA_pol_II_AP1_C |
| InterPro:RNA_pol_II_AP1_N | SUPFAM:SSF48371 | UniParc:UPI0008443AA7 | EnsemblPlantsGene:Zm00001d046366 | EnsemblPlants:Zm00001d046366_P001 | EnsemblPlants:Zm00001d046366_T001 |
| SEG:seg | : | : | : | : | : |
Description
Transcriptional elongation regulator MINIYO
Coordinates
chr9:-:84484694..84497295
Molecular Weight (calculated)
170509.0 Da
IEP (calculated)
6.318
GRAVY (calculated)
-0.167
Length
1539 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDATTKRRHQ PGGAQPTRRK VVEEPFHTAP PTPAAASPSR LVGAIVEKGY SAAAPSSAPR PSVLPFPVAR HRSHGPHWVP LVKDAPKDET ADNDDEMDMD
0101: ETDYHPVAAA AAGPVRRKEK KGMDFSRWRE FVGDAPPKRR QGKPVQAKKQ SDQRIDAGAV ASKVGGVAAE GRGLEGGAMR LDSGNASEGP GPVLLVSDVV
0201: SKKPMSQVES RDELVNTSEA RNLASQAESM DLDGRESSME AEISAENMAR LAGMSAGEIA EAQADIVNKL NPALLEMLRR RGREKSGGTK DVGKDKGLKN
0301: SGLQKNKRAT PGDWLTAGEH TGHSWKVWSE RVERIRSCRF TLDGDILGFQ SSHEQQDGKK MPSESVAERD FLRTEGDPAA VGYTINEAVA LTRSMVPGQR
0401: VLALQLLASI LNRALQSLHK TDLMDNVKGM NSKDNIDDWQ AVWSYALGPE PELVLSLRMA LDDNHDSVVL SCTKVVNVML SCEFNESYFE FSEKVGNGKD
0501: ICTAPVFRSK PDLDGGFLEG GFWKYNTKPS NILPHCGDND EDEADEKHTI QDDVVVSGQD VAAGFVRMGI LPRICFLLEM DPSPALEDYL VSVLVALARH
0601: SPQSADAILN CPRLIQSVTK LLINQGSMEI RSSQIRGVTL LKVFFCHLFC FDQVLSKYNR QTCLNFVNHG VFQQALWHWY RKAGTIEDWV RSGKEKCKLS
0701: SAMMVEQLRF WRTCISYGFC IAHFADFFPV LCLWLSRPDF KKLSEHNVLV EFSSVARESY LVLAALAQRL PLLHSVEQLA NQDLGVSASY IETCSWSHVV
0801: PMVDLALSWL HLNDIPYVCS LISEQNRNTE HMLEMSYLIL VISSVLGMLN SILERISPDV TPEDKSYSLP WIPDFVPKIG LGIISNGFFS CSTTVAGRNA
0901: EHQPFCCASL VQGLCYMRCH GNVDVSLSSI SCLQRLVQLS WSVDRVIQGA TKCCSECFNE SGTGEAGKLL AEGISSLWHN DLLHLLTSLL PMISSQWSIS
1001: QNIEMFGRGG PAPGVGFGWG TCGGGFWSLK CLLAQLDSQL VVELIKCFSS VQGSPIILDE GVKLDNVTNT VVTASNWISS TLGLSLIAGP GQIYMLEKVF
1101: DMIFEPSILK YLKSSIHKFT SDMELLKPFE WDLNEDEYML FSSVLKSHFR SRWLAIKKKH SDKYAGDNSS TKISKTPEIL ETIQEETELS EAVNQPCNTL
1201: MVEWAHQRLP LPIHWILSAV CCIDDPKGTL STSANYILDV SRAGLIFLLG LEAISATPCL HAPLIWKIHA LSVSIRSSMH LLQEDRSRDI FCALQELYGL
1301: HLNRLYQKFC KPNSIEEVKG VVVGTSEEAM EISSLEILRF QEKIHGSYTT FVESLVDQFA AVSYGDFVFG RQVAIYLHRK AEPAVRLAAW NALSSAYVLE
1401: LLPPLDNCIG NAPGYLEPLE DDEKILESYA KSWTSGVLDK ALQRDSMAFT LAKHHLSGFV FQSSDSGTML RKKLVKSLIR CYAQKRHHEV MLKCFVQQGI
1501: AQDSKSSELD RRFEILKDAC EMNSNLVGEV QRLKACLGQ
0101: ETDYHPVAAA AAGPVRRKEK KGMDFSRWRE FVGDAPPKRR QGKPVQAKKQ SDQRIDAGAV ASKVGGVAAE GRGLEGGAMR LDSGNASEGP GPVLLVSDVV
0201: SKKPMSQVES RDELVNTSEA RNLASQAESM DLDGRESSME AEISAENMAR LAGMSAGEIA EAQADIVNKL NPALLEMLRR RGREKSGGTK DVGKDKGLKN
0301: SGLQKNKRAT PGDWLTAGEH TGHSWKVWSE RVERIRSCRF TLDGDILGFQ SSHEQQDGKK MPSESVAERD FLRTEGDPAA VGYTINEAVA LTRSMVPGQR
0401: VLALQLLASI LNRALQSLHK TDLMDNVKGM NSKDNIDDWQ AVWSYALGPE PELVLSLRMA LDDNHDSVVL SCTKVVNVML SCEFNESYFE FSEKVGNGKD
0501: ICTAPVFRSK PDLDGGFLEG GFWKYNTKPS NILPHCGDND EDEADEKHTI QDDVVVSGQD VAAGFVRMGI LPRICFLLEM DPSPALEDYL VSVLVALARH
0601: SPQSADAILN CPRLIQSVTK LLINQGSMEI RSSQIRGVTL LKVFFCHLFC FDQVLSKYNR QTCLNFVNHG VFQQALWHWY RKAGTIEDWV RSGKEKCKLS
0701: SAMMVEQLRF WRTCISYGFC IAHFADFFPV LCLWLSRPDF KKLSEHNVLV EFSSVARESY LVLAALAQRL PLLHSVEQLA NQDLGVSASY IETCSWSHVV
0801: PMVDLALSWL HLNDIPYVCS LISEQNRNTE HMLEMSYLIL VISSVLGMLN SILERISPDV TPEDKSYSLP WIPDFVPKIG LGIISNGFFS CSTTVAGRNA
0901: EHQPFCCASL VQGLCYMRCH GNVDVSLSSI SCLQRLVQLS WSVDRVIQGA TKCCSECFNE SGTGEAGKLL AEGISSLWHN DLLHLLTSLL PMISSQWSIS
1001: QNIEMFGRGG PAPGVGFGWG TCGGGFWSLK CLLAQLDSQL VVELIKCFSS VQGSPIILDE GVKLDNVTNT VVTASNWISS TLGLSLIAGP GQIYMLEKVF
1101: DMIFEPSILK YLKSSIHKFT SDMELLKPFE WDLNEDEYML FSSVLKSHFR SRWLAIKKKH SDKYAGDNSS TKISKTPEIL ETIQEETELS EAVNQPCNTL
1201: MVEWAHQRLP LPIHWILSAV CCIDDPKGTL STSANYILDV SRAGLIFLLG LEAISATPCL HAPLIWKIHA LSVSIRSSMH LLQEDRSRDI FCALQELYGL
1301: HLNRLYQKFC KPNSIEEVKG VVVGTSEEAM EISSLEILRF QEKIHGSYTT FVESLVDQFA AVSYGDFVFG RQVAIYLHRK AEPAVRLAAW NALSSAYVLE
1401: LLPPLDNCIG NAPGYLEPLE DDEKILESYA KSWTSGVLDK ALQRDSMAFT LAKHHLSGFV FQSSDSGTML RKKLVKSLIR CYAQKRHHEV MLKCFVQQGI
1501: AQDSKSSELD RRFEILKDAC EMNSNLVGEV QRLKACLGQ
0001: MEQSSGRVNP EQPNNVLASL VGSIVEKGIS ENKPPSKPLP PRPSLLSFPV ARHRSHGPHL APVGSSIAQP KDYNDDQEEE EAEERFMNAD SIAAFAKPLQ
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
Arabidopsis Description
IYOTranscriptional elongation regulator MINIYO [Source:UniProtKB/Swiss-Prot;Acc:Q8GYU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.