Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G263600.1 | Wheat | nucleus | 90.28 | 92.19 |
| TraesCS7D01G358700.1 | Wheat | nucleus | 90.21 | 91.58 |
| TraesCS7A01G364300.1 | Wheat | nucleus | 89.89 | 91.31 |
| Os06t0574400-01 | Rice | endoplasmic reticulum, plasma membrane | 35.97 | 71.06 |
| EER89976 | Sorghum | cytosol | 68.44 | 68.17 |
| Zm00001d046366_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 67.4 | 67.58 |
| Os06t0574450-00 | Rice | nucleus | 18.66 | 62.07 |
| GSMUA_Achr6P00840_001 | Banana | cytosol | 38.11 | 48.88 |
| VIT_03s0038g03100.t01 | Wine grape | nucleus | 42.26 | 40.7 |
| AT4G38440.1 | Thale cress | nucleus | 37.78 | 39.8 |
| KRH70967 | Soybean | nucleus | 40.18 | 38.77 |
| Solyc01g111910.2.1 | Tomato | nucleus | 38.63 | 38.3 |
| KRH75108 | Soybean | golgi, mitochondrion, nucleus, plasma membrane | 40.51 | 37.9 |
| CDY44583 | Canola | cytosol, nucleus, plasma membrane, plastid | 35.71 | 32.17 |
| CDY36825 | Canola | cytosol | 35.64 | 32.16 |
| Bra025599.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 35.45 | 31.99 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G086420.15 | EnsemblPlantsGene:HORVU7Hr1G086420 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0030154 | InterPro:ARM-type_fold |
| InterPro:RNA_pol_II_AP1_C | InterPro:RNA_pol_II_AP1_N | PANTHER:PTHR21483 | PFAM:PF08620 | PFAM:PF08621 | SEG:seg |
| SUPFAM:SSF48371 | UniParc:UPI000B47F561 | UniProt:A0A287X6P6 | MapMan:15.3.6.5 | : | : |
Description
No Description!
Coordinates
chrchr7H:-:521771704..521780221
Molecular Weight (calculated)
166969.0 Da
IEP (calculated)
6.265
GRAVY (calculated)
-0.133
Length
1543 amino acids
Sequence
(BLAST)
(BLAST)
0001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXAAAAPAAA TVASPAHLVG AIVEKGFSAA APSSAPRPTV LPFPVARHRS HGPHWKPVAK GADKKKGEGE
0101: EEDYGMDVDD MDYQPAAAVA GPVRRKEKKG MDFSRWREFV ADDVPPKRRQ AKKDNTKKID HVAEVKNAVG QVGERGLGGD GMELDSGNGR EALGPMGLVS
0201: DVLSKKLINA GDASMTEGGA GVAELQGVSM QLDDGEPSIA AEINAENTAR LAGMSAEEIA EAQADILNRM DPALVEVLRR RGRDKSGGKK DKGKDKSRQT
0301: SGPGKTAKAV PGEHLTASEQ SAHSWKAWSE RVERIRLCRF GLDGDITGFQ SSQEQQDGKL FLLCPLEFSF LWWHQSLPFL LVGNKTHGEN VAERDFLRTE
0401: GDPAAVGYTI NEALALTRSM VPGQRVLALQ LLASVLNRAL HNLHKMDLAD NVEGANYAEK AYDWQAVWAY ALGPEPELVL SLRMSLDDNH ESVVLACAKV
0501: INVMLSYDMN ESYFDFSEKL INQTEDICTA PVFRSKPDVD GGFLEGGFWK YNTKPSNILP HYGEDDEEES DEKHTIQDDV IVSGQDVAAG LIRMGILPRI
0601: CSLLEMDPPQ IQKDYLVSIL VALARHSPQS ADAILNCTKL VQCVVKLLYR QGSMEIHSSM IRGVTLLKVL SKYNRQTCLN FINNGVFQQA MWRWFLPSYT
0701: LKDWIKPGKE QCKLISAMMV EQLRFWRTCI SYGFCVSHFT NFFPVLCLWL SPPVFQNLSE HNVISEFSSI ARESFLVLGA LAQRLPLLHS VEQFGKQDVG
0801: VPGIYGEIWS WSHVVPMVDL ALSWLHLNDI PYLCSLINVQ SENTTHIPEQ SCLVLLISSV LGMLNSTLER ISPEGTPDSA SYCLPWIPDF VPKIGLGIIT
0901: NGFFSFSCTE VGRHDEQLPS CGVSLVHGLC HMRCWGNVDA SLSSISCLQR LVQLSCSVDR VIKRATTNSS EHLKESKAGL AGKILQEGIS SLWHNDLLNF
1001: LTSLLPMISS QWPVLKNIGM FGRGGLAPGV GFGWGTCGGG FWSLKCLLAQ LDSQLVLELI KIVSAAPEGL VTLSKGANSD NVSNPFTNAS ERISPVLGVS
1101: LIAGPGQIST LERAFDILFQ PSVLKCLKSS IHCLTSQMNL PKTLEWDITE DEYQHFSSVL NSHFRSRWLA IKKKNPDKHA RNNSAINKPK VPEMLETIQE
1201: EMELTEVVNP PCSTLVLEWA HQRLPLPVHW ILSSICCTDD ADVSRAGLIF LLGLEAVSAA PSLDVPLVWK MHALSASVRT SMDLLQEDRS KDVFEALQEL
1301: YGQHLDMLCQ KYYRSHSANN DEVLGSMATV EEVKVISTHE ILRFKEKIHE SYTTFVESVV DQFAAVSYGD VIFGRQVAIY LHRSVETTVR LAAWNALSTA
1401: YVLELLPPLN KCIGDVKGYL EPLEDDERIL EAYAKSWTSG ILDKAARRDS MSFTLAKHHL SGFVFRCSAS VKVRNKMVKS LIRCYSQKQH HETMLQSLVL
1501: QGVPRDSQYG GEVGRRIEIL KDACEMNSSL LAEVERLKTS IDV
0101: EEDYGMDVDD MDYQPAAAVA GPVRRKEKKG MDFSRWREFV ADDVPPKRRQ AKKDNTKKID HVAEVKNAVG QVGERGLGGD GMELDSGNGR EALGPMGLVS
0201: DVLSKKLINA GDASMTEGGA GVAELQGVSM QLDDGEPSIA AEINAENTAR LAGMSAEEIA EAQADILNRM DPALVEVLRR RGRDKSGGKK DKGKDKSRQT
0301: SGPGKTAKAV PGEHLTASEQ SAHSWKAWSE RVERIRLCRF GLDGDITGFQ SSQEQQDGKL FLLCPLEFSF LWWHQSLPFL LVGNKTHGEN VAERDFLRTE
0401: GDPAAVGYTI NEALALTRSM VPGQRVLALQ LLASVLNRAL HNLHKMDLAD NVEGANYAEK AYDWQAVWAY ALGPEPELVL SLRMSLDDNH ESVVLACAKV
0501: INVMLSYDMN ESYFDFSEKL INQTEDICTA PVFRSKPDVD GGFLEGGFWK YNTKPSNILP HYGEDDEEES DEKHTIQDDV IVSGQDVAAG LIRMGILPRI
0601: CSLLEMDPPQ IQKDYLVSIL VALARHSPQS ADAILNCTKL VQCVVKLLYR QGSMEIHSSM IRGVTLLKVL SKYNRQTCLN FINNGVFQQA MWRWFLPSYT
0701: LKDWIKPGKE QCKLISAMMV EQLRFWRTCI SYGFCVSHFT NFFPVLCLWL SPPVFQNLSE HNVISEFSSI ARESFLVLGA LAQRLPLLHS VEQFGKQDVG
0801: VPGIYGEIWS WSHVVPMVDL ALSWLHLNDI PYLCSLINVQ SENTTHIPEQ SCLVLLISSV LGMLNSTLER ISPEGTPDSA SYCLPWIPDF VPKIGLGIIT
0901: NGFFSFSCTE VGRHDEQLPS CGVSLVHGLC HMRCWGNVDA SLSSISCLQR LVQLSCSVDR VIKRATTNSS EHLKESKAGL AGKILQEGIS SLWHNDLLNF
1001: LTSLLPMISS QWPVLKNIGM FGRGGLAPGV GFGWGTCGGG FWSLKCLLAQ LDSQLVLELI KIVSAAPEGL VTLSKGANSD NVSNPFTNAS ERISPVLGVS
1101: LIAGPGQIST LERAFDILFQ PSVLKCLKSS IHCLTSQMNL PKTLEWDITE DEYQHFSSVL NSHFRSRWLA IKKKNPDKHA RNNSAINKPK VPEMLETIQE
1201: EMELTEVVNP PCSTLVLEWA HQRLPLPVHW ILSSICCTDD ADVSRAGLIF LLGLEAVSAA PSLDVPLVWK MHALSASVRT SMDLLQEDRS KDVFEALQEL
1301: YGQHLDMLCQ KYYRSHSANN DEVLGSMATV EEVKVISTHE ILRFKEKIHE SYTTFVESVV DQFAAVSYGD VIFGRQVAIY LHRSVETTVR LAAWNALSTA
1401: YVLELLPPLN KCIGDVKGYL EPLEDDERIL EAYAKSWTSG ILDKAARRDS MSFTLAKHHL SGFVFRCSAS VKVRNKMVKS LIRCYSQKQH HETMLQSLVL
1501: QGVPRDSQYG GEVGRRIEIL KDACEMNSSL LAEVERLKTS IDV
0001: MEQSSGRVNP EQPNNVLASL VGSIVEKGIS ENKPPSKPLP PRPSLLSFPV ARHRSHGPHL APVGSSIAQP KDYNDDQEEE EAEERFMNAD SIAAFAKPLQ
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
0101: RKEKKDMDLG RWKDMVSGDD PASTHVPQQS RKLKIIETRP PYVASADAAT TSSNTLLAAR ASDQREFVSD KAPFIKNLGT KERVPLNASP PLAVSNGLGT
0201: RHASSSLESD IDVENHAKLQ TMSPDEIAEA QAELLDKMDP ALLSILKKRG EAKLKKRKHS VQGVSITDET AKNSRTEGHF VTPKVMAIPK EKSVVQKPGI
0301: AQGFVWDAWT ERVEAARDLR FSFDGNVVEE DVVSPAETGG KWSGVESAAE RDFLRTEGDP GAAGYTIKEA IALARSVIPG QRCLALHLLA SVLDKALNKL
0401: CQSRIGYARE EKDKSTDWEA IWAYALGPEP ELVLALRMAL DDNHASVVIA CVKVIQCLLS CSLNENFFNI LENMGPHGKD IFTASVFRSK PEIDLGFLRG
0501: CYWKYSAKPS NIVAFREEIL DDGTEDTDTI QKDVFVAGQD VAAGLVRMDI LPRIYHLLET EPTAALEDSI ISVTIAIARH SPKCTTAILK YPKFVQTIVK
0601: RFQLNKRMDV LSSQINSVRL LKVLARYDQS TCMEFVKNGT FNAVTWHLFQ FTSSLDSWVK LGKQNCKLSS TLMVEQLRFW KVCIHSGCCV SRFPELFPAL
0701: CLWLSCPSFE KLREKNLISE FTSVSNEAYL VLEAFAETLP NMYSQNIPRN ESGTWDWSYV SPMIDSALSW ITLAPQLLKW EKGIESVSVS TTTLLWLYSG
0801: VMRTISKVLE KISAEGEEEP LPWLPEFVPK IGLAIIKHKL LSFSVADVSR FGKDSSRCSS FMEYLCFLRE RSQDDELALA SVNCLHGLTR TIVSIQNLIE
0901: SARSKMKAPH QVSISTGDES VLANGILAES LAELTSVSCS FRDSVSSEWP IVQSIELHKR GGLAPGVGLG WGASGGGFWS TRVLLAQAGA GLLSLFLNIS
1001: LSDSQNDQGS VGFMDKVNSA LAMCLIAGPR DYLLVERAFE YVLRPHALEH LACCIKSNKK NISFEWECSE GDYHRMSSML ASHFRHRWLQ QKGRSIAEEG
1101: VSGVRKGTVG LETIHEDGEM SNSSTQDKKS DSSTIEWAHQ RMPLPPHWFL SAISAVHSGK TSTGPPESTE LLEVAKAGVF FLAGLESSSG FGSLPSPVVS
1201: VPLVWKFHAL STVLLVGMDI IEDKNTRNLY NYLQELYGQF LDEARLNHRD TELLRFKSDI HENYSTFLEM VVEQYAAVSY GDVVYGRQVS VYLHQCVEHS
1301: VRLSAWTVLS NARVLELLPS LDKCLGEADG YLEPVEENEA VLEAYLKSWT CGALDRAATR GSVAYTLVVH HFSSLVFCNQ AKDKVSLRNK IVKTLVRDLS
1401: RKRHREGMML DLLRYKKGSA NAMEEEVIAA ETEKRMEVLK EGCEGNSTLL LELEKLKSAA LCGRR
Arabidopsis Description
IYOTranscriptional elongation regulator MINIYO [Source:UniProtKB/Swiss-Prot;Acc:Q8GYU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.