CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03095	Soybean	nucleus	89.67	89.33
VIT_18s0001g13560.t01	Wine grape	nucleus	57.55	55.64
Solyc04g081030.2.1	Tomato	nucleus	51.82	52.42
CDY23025	Canola	nucleus	47.04	51.04
Bra012912.1-P	Field mustard	nucleus	46.85	50.83
CDY02100	Canola	nucleus	46.65	50.62
GSMUA_Achr11P...	Banana	nucleus	48.37	50.1
AT3G49990.1	Thale cress	nucleus	47.04	49.0
Zm00001d029300_P001	Maize	mitochondrion	40.73	46.61
OQU92533	Sorghum	nucleus	42.45	44.94
Zm00001d047407_P001	Maize	cytosol, mitochondrion, nucleus, plastid	42.45	44.85
Zm00001d047404_P001	Maize	cytosol, mitochondrion, nucleus, plastid	42.45	44.85
Os03t0372700-02	Rice	cytosol	42.45	44.4
TraesCS5B01G256200.1	Wheat	mitochondrion	40.34	43.59
TraesCS5D01G265300.1	Wheat	mitochondrion	40.15	43.48
TraesCS5A01G256700.1	Wheat	mitochondrion	40.15	43.39
PGSC0003DMT400009516	Potato	nucleus	51.63	42.59
HORVU5Hr1G071840.1	Barley	nucleus	40.54	40.85
Zm00001d030362_P001	Maize	cytosol, mitochondrion	13.19	38.12
Zm00001d048919_P001	Maize	cytosol	13.19	38.12
Zm00001d021590_P001	Maize	cytosol, mitochondrion	13.19	38.12
Os07t0634300-01	Rice	mitochondrion	17.97	36.43
TraesCS2B01G178500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	16.63	32.58
EER99764	Sorghum	mitochondrion	23.52	31.3
TraesCS2A01G153400.1	Wheat	cytosol, mitochondrion, nucleus, plastid	15.68	30.15
Zm00001d022252_P001	Maize	mitochondrion, nucleus	22.37	29.62
TraesCS2D01G158700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	15.49	29.56

Protein Annotations

EntrezGene:100805612	MapMan:17.1.3.2.2.1	EMBL:ACUP02002798	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G023000	GO:GO:0000056
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005768
GO:GO:0005773	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0030688	GO:GO:0031902
GO:GO:0034448	GO:GO:0042274	UniProt:I1JZK7	EnsemblPlants:KRH56853	ProteinID:KRH56853	ProteinID:KRH56853.1
ProteinID:KRH56855.1	InterPro:LTV	PFAM:PF04180	PANTHER:PTHR21531	UniParc:UPI000233A26C	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:2011625..2014702

Molecular Weight (calculated)

58862.2 Da

IEP (calculated)

4.376

GRAVY (calculated)

-0.936

Length

523 amino acids

Sequence
(BLAST)

001: MGGRKKKFID KKNSATFQLI ARDTSDPSFS QSDRVFVRVD NNPVSFPVAD DSAFDDAPDD YYYDDDAGVS GGPLPEDVRR EILELGFPDD GYNYLNHLRE
101: IKNSGAGAAF YHNPKFKLQH LPRDVKAFDA SRLQIAEADG EPEENTIYSV ASKTTSVRVQ KAVDPEVAAL LDDDDLSRLG SDVEDLEEDF VVQANLLEDE
201: DEDEEEKDCI FNETSFSEES AIHRNGNSAH ALQVSSYSRV TDDSGPLDGV TDGVPGEDCV GEKQRARRLL DEQFDLLERQ EYGTDDDDGD YYENYEADED
301: ESLAEKLKHS LNNHVLDDLE LDDDKYKVPA DLLKNKDAPH EEQEDSAADV IRRCKEYAEE YEVEDDHKDV VLVQESSDES EVWDCETIVS MYSNLDNHPG
401: KIEAPGVTRK KKLSETVSAV LSSSSQIIPL RGKEKLPVDF LPGGRKPATE KVKGQSIAKT EQYKRKQHGL ESKEEKKERK AAVKEERHEA RRNKKEMKEL
501: YKCEAHRAQR AAAVSGPSSI HLL

Best Arabidopsis Sequence Match ( AT3G49990.1 )
(BLAST)

001: MGKKKFIDKK KAATFELCPR DTSDPRYSDA PGGDKIFLRV DQNPVNINGF IEEDEEEEGD SSRFDDAPEE MDYGYSSFGD SSSSLPAHVR KEILELGYPD
101: DGYNYLEHLR EIKNTGGGSN FYVNPKYEVA QLPRDVKAYD ASRVKISGMV NEEGNDNKLM YSVASKTVNV KVQKAIDPEV AALLENSDGS EFGSDVEDLE
201: EDFVVQANLT QKGESSGVSN GELEFSVRRE VRERESDEPV AENPRVPRQI DELFDQLELN EYGSDSDGDG YIAEDGEEEE EEDFMAQEVQ NLIHGKAKDY
301: ELEEKYMNPA DILKNSDSVR DKEEVDTAAH VIRRTVEYGE NFDNGNEDEF VELTEESSDE SEKHDCETIV STYSNLDNLP GKILAAESAR QKKLSETLAN
401: ALSSNGRIIN LQGRERIPVE FLPGRRAEQT DVKAEIPKAE PIKRKTHGQE SKEEKKERKN AVKAEKREAR IIKKQTKMLY CGETQRAQRA VATSGPSSRP
501: LK

Arabidopsis Description

At3g49990 [Source:UniProtKB/TrEMBL;Acc:Q9SN19]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.