Factsheet for Solyc04g081030.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009516	Potato	nucleus	95.94	78.23
VIT_18s0001g13560.t01	Wine grape	nucleus	55.32	52.87
KRH56853	Soybean	nucleus	52.42	51.82
KRH03095	Soybean	nucleus	52.42	51.62
GSMUA_Achr11P...	Banana	nucleus	49.32	50.49
CDY23025	Canola	nucleus	47.0	50.41
CDY02100	Canola	nucleus	46.81	50.21
Bra012912.1-P	Field mustard	nucleus	46.23	49.59
AT3G49990.1	Thale cress	nucleus	45.26	46.61
Zm00001d029300_P001	Maize	mitochondrion	39.27	44.42
OQU92533	Sorghum	nucleus	41.2	43.12
Os03t0372700-02	Rice	cytosol	41.39	42.8
TraesCS5A01G256700.1	Wheat	mitochondrion	39.85	42.56
TraesCS5B01G256200.1	Wheat	mitochondrion	39.85	42.56
TraesCS5D01G265300.1	Wheat	mitochondrion	39.46	42.24
Zm00001d047407_P001	Maize	cytosol, mitochondrion, nucleus, plastid	40.23	42.02
Zm00001d047404_P001	Maize	cytosol, mitochondrion, nucleus, plastid	40.23	42.02
HORVU5Hr1G071840.1	Barley	nucleus	40.43	40.27
Zm00001d030362_P001	Maize	cytosol, mitochondrion	13.54	38.67
Zm00001d048919_P001	Maize	cytosol	13.54	38.67
Zm00001d021590_P001	Maize	cytosol, mitochondrion	13.54	38.67
Os07t0634300-01	Rice	mitochondrion	17.6	35.27
TraesCS2B01G178500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	16.44	31.84
EER99764	Sorghum	mitochondrion	21.66	28.5
TraesCS2A01G153400.1	Wheat	cytosol, mitochondrion, nucleus, plastid	14.89	28.31
TraesCS2D01G158700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	14.51	27.37
Zm00001d022252_P001	Maize	mitochondrion, nucleus	20.89	27.34

Protein Annotations

MapMan:17.1.3.2.2.1	ncoils:Coil	GO:GO:0000056	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005768	GO:GO:0005773	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0030688	GO:GO:0031902	GO:GO:0034448	GO:GO:0042274	UniProt:K4BVI2
InterPro:LTV	PFAM:PF04180	PANTHER:PTHR21531	EnsemblPlantsGene:Solyc04g081030.2	EnsemblPlants:Solyc04g081030.2.1	UniParc:UPI0002765C94
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4:+:65091973..65097284

Molecular Weight (calculated)

57978.8 Da

IEP (calculated)

4.490

GRAVY (calculated)

-0.925

Length

517 amino acids

Sequence
(BLAST)

001: MGKKKFIDKK KSATFQLFAC DSSDPAYESG SSGADRVFVR VDNNTSYSVD AFHSSDQFNP DDPNSIYADA PEDEEVYNGW AAGYSGTGNQ AVMLPDNVRK
101: EILELGFPDD GYNYLHHLRE IKNTGGGSAY YENPKAKLTE LPRDVKAYDA SRVAVAKVDD DSNEKYVYNV AAKTVGVRVQ KAVDPEVAAL LDDSDLSRFG
201: SDDEDLELEE DFVITANLPD GADNVELDKN LRLIERSDVD KVGSNDTAGP VQRNEAKFAT IEEKPRARRP LDEQFDMLEL EEYGSDTEEE YDGDMIEENE
301: CHESLAEKLN HAFKERAIDG LELNNYGPDD AELLEPEADV INRCREYAEK YENEGPAEET AIFDESSSDS EVWDCETIVS TYSNLDNHPG KIVAPEARRK
401: KLLPAISEAS PIISLKGKAN LPVDYLPSKG KHALLKEDKK KQGSEKEGKD NPMKEQLKRK QHGQESKEEK KERKAAVKEE RREARRMKKE TKELYKCEAQ
501: RAQKVAAFTG PSAIHLM

Best Arabidopsis Sequence Match ( AT3G49990.1 )
(BLAST)

001: MGKKKFIDKK KAATFELCPR DTSDPRYSDA PGGDKIFLRV DQNPVNINGF IEEDEEEEGD SSRFDDAPEE MDYGYSSFGD SSSSLPAHVR KEILELGYPD
101: DGYNYLEHLR EIKNTGGGSN FYVNPKYEVA QLPRDVKAYD ASRVKISGMV NEEGNDNKLM YSVASKTVNV KVQKAIDPEV AALLENSDGS EFGSDVEDLE
201: EDFVVQANLT QKGESSGVSN GELEFSVRRE VRERESDEPV AENPRVPRQI DELFDQLELN EYGSDSDGDG YIAEDGEEEE EEDFMAQEVQ NLIHGKAKDY
301: ELEEKYMNPA DILKNSDSVR DKEEVDTAAH VIRRTVEYGE NFDNGNEDEF VELTEESSDE SEKHDCETIV STYSNLDNLP GKILAAESAR QKKLSETLAN
401: ALSSNGRIIN LQGRERIPVE FLPGRRAEQT DVKAEIPKAE PIKRKTHGQE SKEEKKERKN AVKAEKREAR IIKKQTKMLY CGETQRAQRA VATSGPSSRP
501: LK

Arabidopsis Description

At3g49990 [Source:UniProtKB/TrEMBL;Acc:Q9SN19]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.