Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G256200.1 | Wheat | mitochondrion | 98.55 | 98.55 |
| TraesCS5D01G265300.1 | Wheat | mitochondrion | 98.14 | 98.34 |
| HORVU5Hr1G071840.1 | Barley | nucleus | 94.83 | 88.44 |
| Os03t0372700-02 | Rice | cytosol | 80.37 | 77.8 |
| Zm00001d029300_P001 | Maize | mitochondrion | 70.45 | 74.62 |
| OQU92533 | Sorghum | nucleus | 75.83 | 74.29 |
| Zm00001d047407_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 73.97 | 72.32 |
| Zm00001d047404_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 73.97 | 72.32 |
| Zm00001d030362_P001 | Maize | cytosol, mitochondrion | 25.0 | 66.85 |
| Zm00001d021590_P001 | Maize | cytosol, mitochondrion | 25.0 | 66.85 |
| Zm00001d048919_P001 | Maize | cytosol | 24.38 | 65.19 |
| GSMUA_Achr11P... | Banana | nucleus | 47.93 | 45.94 |
| Bra012912.1-P | Field mustard | nucleus | 42.15 | 42.32 |
| CDY02100 | Canola | nucleus | 41.53 | 41.7 |
| CDY23025 | Canola | nucleus | 41.32 | 41.49 |
| KRH03095 | Soybean | nucleus | 43.8 | 40.38 |
| KRH56853 | Soybean | nucleus | 43.39 | 40.15 |
| VIT_18s0001g13560.t01 | Wine grape | nucleus | 44.83 | 40.11 |
| Solyc04g081030.2.1 | Tomato | nucleus | 42.56 | 39.85 |
| AT3G49990.1 | Thale cress | nucleus | 40.7 | 39.24 |
| TraesCS2A01G153400.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 21.9 | 38.97 |
| PGSC0003DMT400009516 | Potato | nucleus | 42.56 | 32.49 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G256700.1 | EnsemblPlantsGene:TraesCS5A01G256700 | InterPro:LTV | ncoils:Coil | PANTHER:PTHR21531 | PFAM:PF04180 |
| SEG:seg | MapMan:17.1.3.2.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:472274579..472278029
Molecular Weight (calculated)
54159.5 Da
IEP (calculated)
4.347
GRAVY (calculated)
-0.830
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAGVGGRK ARNFATFRLF PRDGAADPND RVFVRVDNNA YTIPGFGDDE DPSLSPTAAA DQFPSSTSAP LPDHVRQQIL ELGLPDDGYN YLLHLRELRP
101: SAVASSFVPS HTARPEQLPL DVKAYDASKV RVASGKVEEE LDEGRTMCKV AAKTAPVRRV EKAVDPDVAR LLDESEDEGL EEDFVIMANQ AEGDDMEDES
201: EEEGGGVFSD VENDEEFDNE EDEPKPRVPR LLDEQFDLLA LEEYGASDDD DGAVRDGEHE LPTEVIDELK LFHNQNVCVD EEYRTPADFV RGKLDSTTTE
301: EVDESANVIQ KCAEYAERYL NETAEDEEVL LVSESSDESE VWDCETIVST YSNLDNHPGK IQTPGNPRNR LPKVFPGETA TTKDIIKLHG KEKLPVDYLP
401: QRKRKVEKEK KAKPTEASDA EYYFEKVVVQ KETKDEKKAR KSAVKEEKRE ARKAKKELKE LYKFETQKAQ KVAAVTGPSS IRLI
101: SAVASSFVPS HTARPEQLPL DVKAYDASKV RVASGKVEEE LDEGRTMCKV AAKTAPVRRV EKAVDPDVAR LLDESEDEGL EEDFVIMANQ AEGDDMEDES
201: EEEGGGVFSD VENDEEFDNE EDEPKPRVPR LLDEQFDLLA LEEYGASDDD DGAVRDGEHE LPTEVIDELK LFHNQNVCVD EEYRTPADFV RGKLDSTTTE
301: EVDESANVIQ KCAEYAERYL NETAEDEEVL LVSESSDESE VWDCETIVST YSNLDNHPGK IQTPGNPRNR LPKVFPGETA TTKDIIKLHG KEKLPVDYLP
401: QRKRKVEKEK KAKPTEASDA EYYFEKVVVQ KETKDEKKAR KSAVKEEKRE ARKAKKELKE LYKFETQKAQ KVAAVTGPSS IRLI
001: MGKKKFIDKK KAATFELCPR DTSDPRYSDA PGGDKIFLRV DQNPVNINGF IEEDEEEEGD SSRFDDAPEE MDYGYSSFGD SSSSLPAHVR KEILELGYPD
101: DGYNYLEHLR EIKNTGGGSN FYVNPKYEVA QLPRDVKAYD ASRVKISGMV NEEGNDNKLM YSVASKTVNV KVQKAIDPEV AALLENSDGS EFGSDVEDLE
201: EDFVVQANLT QKGESSGVSN GELEFSVRRE VRERESDEPV AENPRVPRQI DELFDQLELN EYGSDSDGDG YIAEDGEEEE EEDFMAQEVQ NLIHGKAKDY
301: ELEEKYMNPA DILKNSDSVR DKEEVDTAAH VIRRTVEYGE NFDNGNEDEF VELTEESSDE SEKHDCETIV STYSNLDNLP GKILAAESAR QKKLSETLAN
401: ALSSNGRIIN LQGRERIPVE FLPGRRAEQT DVKAEIPKAE PIKRKTHGQE SKEEKKERKN AVKAEKREAR IIKKQTKMLY CGETQRAQRA VATSGPSSRP
501: LK
101: DGYNYLEHLR EIKNTGGGSN FYVNPKYEVA QLPRDVKAYD ASRVKISGMV NEEGNDNKLM YSVASKTVNV KVQKAIDPEV AALLENSDGS EFGSDVEDLE
201: EDFVVQANLT QKGESSGVSN GELEFSVRRE VRERESDEPV AENPRVPRQI DELFDQLELN EYGSDSDGDG YIAEDGEEEE EEDFMAQEVQ NLIHGKAKDY
301: ELEEKYMNPA DILKNSDSVR DKEEVDTAAH VIRRTVEYGE NFDNGNEDEF VELTEESSDE SEKHDCETIV STYSNLDNLP GKILAAESAR QKKLSETLAN
401: ALSSNGRIIN LQGRERIPVE FLPGRRAEQT DVKAEIPKAE PIKRKTHGQE SKEEKKERKN AVKAEKREAR IIKKQTKMLY CGETQRAQRA VATSGPSSRP
501: LK
Arabidopsis Description
At3g49990 [Source:UniProtKB/TrEMBL;Acc:Q9SN19]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.