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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 4
  • plastid 1
  • nucleus 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G25980.1 Zm00001d033954_P001 AT1G56290.1 20706207
AT3G25980.1 Zm00001d039966_P001 AT1G62390.1 20706207
AT3G25980.1 Zm00001d006032_P001 AT2G17350.1 20706207
AT3G25980.1 Zm00001d035817_P001 AT2G35050.1 20706207
AT3G25980.1 Zm00001d031937_P001 AT2G36130.1 20706207
AT3G25980.1 Zm00001d029548_P007 AT2G36230.1 20706207
AT3G25980.1 Zm00001d038142_P034 AT2G36230.1 20706207
AT3G25980.1 Zm00001d013010_P002 AT2G38730.1 20706207
AT3G25980.1 Zm00001d001966_P001 AT3G11270.1 20706207
AT3G25980.1 Zm00001d026517_P001 AT3G11270.1 20706207
AT3G25980.1 Zm00001d053857_P002 AT3G11830.1 20706207
AT3G25980.1 Zm00001d011405_P001 AT3G16060.1 20706207
AT3G25980.1 Zm00001d044170_P001 AT3G16060.1 20706207
AT3G25980.1 Zm00001d009215_P001 AT3G16980.1 20706207
AT3G25980.1 Zm00001d022141_P007 AT3G16980.1 20706207
AT3G25980.1 Zm00001d003249_P001 AT3G25980.1 25262777
AT3G25980.1 Zm00001d025721_P001 AT3G25980.1 25262777
AT3G25980.1 Zm00001d021590_P001 AT3G49990.1 20706207
AT3G25980.1 Zm00001d022252_P001 AT3G49990.1 20706207
AT3G25980.1 Zm00001d029300_P001 AT3G49990.1 20706207
AT3G25980.1 Zm00001d030362_P001 AT3G49990.1 20706207
AT3G25980.1 Zm00001d047404_P001 AT3G49990.1 20706207
AT3G25980.1 Zm00001d047407_P001 AT3G49990.1 20706207
AT3G25980.1 Zm00001d048919_P001 AT3G49990.1 20706207
AT3G25980.1 Zm00001d010336_P001 AT4G04800.1 20706207
AT3G25980.1 Zm00001d029044_P006 AT4G19210.1 20706207
AT3G25980.1 Zm00001d047534_P007 AT4G19210.1 20706207
AT3G25980.1 Zm00001d010336_P001 AT4G21860.1 20706207
AT3G25980.1 Zm00001d030659_P003 AT4G24680.1 20706207
AT3G25980.1 Zm00001d041592_P002 AT4G24680.1 20706207
AT3G25980.1 Zm00001d011723_P002 AT4G32650.1 20706207
AT3G25980.1 Zm00001d011729_P002 AT4G32650.1 20706207
AT3G25980.1 Zm00001d016987_P001 AT4G32650.1 20706207
AT3G25980.1 Zm00001d018287_P001 AT4G35740.1 20706207
AT3G25980.1 Zm00001d046366_P001 AT4G38440.1 20706207
AT3G25980.1 Zm00001d023279_P001 AT5G05510.1 25262777
AT3G25980.1 Zm00001d014988_P001 AT5G41190.1 20706207
AT3G25980.1 Zm00001d054047_P001 AT5G41190.1 20706207
AT3G25980.1 Zm00001d012827_P002 AT5G46750.1 20706207
AT3G25980.1 Zm00001d030031_P002 AT5G46750.1 20706207
AT3G25980.1 Zm00001d034885_P002 AT5G46750.1 20706207
AT3G25980.1 Zm00001d047020_P002 AT5G46750.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES12410 Sorghum mitochondrion 88.84 92.27
GSMUA_Achr6P21190_001 Banana cytosol, nucleus, plastid 33.49 86.75
Os04t0486500-01 Rice mitochondrion 82.79 85.99
VIT_01s0010g02430.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 79.07 82.13
KRH31421 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 79.07 82.13
KRG97470 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 79.07 82.13
TraesCS2A01G320000.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 78.14 81.16
TraesCS2B01G363300.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 77.67 80.68
Bra017340.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 78.14 80.38
CDY39177 Canola cytosol 78.14 80.38
CDY04187 Canola cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 78.14 80.38
PGSC0003DMT400045025 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 77.21 79.81
TraesCS2D01G343300.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 76.74 79.71
Solyc05g014370.2.1 Tomato mitochondrion 76.74 79.33
AT3G25980.1 Thale cress cytosol 75.35 77.51
CDX83576 Canola extracellular, golgi 48.37 74.29
KRH08024 Soybean cytosol 34.88 70.09
Bra025176.1-P Field mustard cytosol 28.37 64.21
HORVU2Hr1G084050.1 Barley plastid 78.14 61.76
Zm00001d003249_P001 Maize mitochondrion 75.35 34.03
Protein Annotations
MapMan:13.3.5.5.4Gene3D:3.30.900.10EntrezGene:542621UniProt:A0A1D6J8X0ProteinID:AQK44365.1GO:GO:0007049
GO:GO:0007094GO:GO:0008150GO:GO:0009987GO:GO:0016043InterPro:HORMA_domInterPro:HORMA_dom_sf
InterPro:IPR003511InterPro:IPR036570InterPro:Mad2PFAM:PF02301PFscan:PS50815PANTHER:PTHR11842
PANTHER:PTHR11842:SF11SUPFAM:SSF56019UniParc:UPI000843752CEnsemblPlantsGene:Zm00001d025721EnsemblPlants:Zm00001d025721_P001EnsemblPlants:Zm00001d025721_T001
Description
Mitotic spindle checkpoint protein MAD2
Coordinates
chr10:-:127518803..127520726
Molecular Weight (calculated)
24159.9 Da
IEP (calculated)
4.870
GRAVY (calculated)
-0.191
Length
215 amino acids
Sequence
(BLAST)
001: MASRSASKDI ITLRGSAAIV SEFFGYAANR YGTLYSARQT AAVPVHPGLD RKVKKYGLTM LLTQDEGVKN FIASLTSQLS EWLEAGKLQR IVLVIMSKAT
101: SEVLERWNFN IVTDAEVVEK GAIKEKSDKE IMREIQAIMR QIASCITYLP CLDEPCVFDV LAYTDTDVDA PGTWVESDAK LIDNPQMVKL HSFDTKIHKV
201: DTLVSYKKDE WDEEE
Best Arabidopsis Sequence Match ( AT3G25980.1 )
(BLAST)
001: MASKTAAAKD IITLHGSAAI VSEFFCYAAN SILYNRAVYP EESFVKVKKY GLPMLLIEDE SVKSFMSNLT SQISEWLEAG KLQRVVLVIM SKATGEVLER
101: WNFRIETDNE VVDKGVSREK SDKEIMREIQ AIMRQVASSV TYLPCLDETC VFDVLAYTDT DVAVPFTWIE SDPKLIANPQ MVKLHGFDTK IHKVDTLVSY
201: KNDEWDEEE
Arabidopsis Description
MAD2Mitotic spindle checkpoint protein MAD2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU93]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.