Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G332700.1 | Wheat | cytosol | 40.32 | 65.79 |
| OQU89695 | Sorghum | cytosol | 48.39 | 51.28 |
| Os08t0511800-01 | Rice | cytosol | 47.58 | 50.43 |
| TraesCS7D01G246800.1 | Wheat | cytosol | 46.77 | 49.57 |
| TraesCS7A01G248000.1 | Wheat | cytosol | 46.77 | 49.57 |
| Os09t0491692-01 | Rice | cytosol | 46.77 | 49.57 |
| GSMUA_Achr5P23830_001 | Banana | cytosol | 46.77 | 49.57 |
| HORVU5Hr1G073560.2 | Barley | cytosol | 47.58 | 48.76 |
| Solyc06g065200.2.1 | Tomato | cytosol | 45.97 | 48.72 |
| PGSC0003DMT400067151 | Potato | cytosol | 45.97 | 48.72 |
| KRG99297 | Soybean | cytosol | 45.16 | 47.86 |
| KRH45717 | Soybean | cytosol | 45.16 | 47.86 |
| Bra002050.1-P | Field mustard | cytosol | 44.35 | 47.01 |
| CDY66480 | Canola | cytosol | 44.35 | 47.01 |
| CDY50203 | Canola | cytosol | 44.35 | 47.01 |
| CDY07860 | Canola | cytosol | 44.35 | 47.01 |
| CDX87994 | Canola | cytosol | 44.35 | 47.01 |
| Bra009650.1-P | Field mustard | cytosol | 44.35 | 47.01 |
| AT2G17350.1 | Thale cress | cytosol | 44.35 | 47.01 |
| EES14256 | Sorghum | cytosol | 43.55 | 46.15 |
| VIT_07s0104g00080.t01 | Wine grape | cytosol, mitochondrion, nucleus | 28.23 | 39.33 |
Protein Annotations
| EnsemblPlants:Zm00001d006032_P001 | EnsemblPlants:Zm00001d006032_T001 | EnsemblPlantsGene:Zm00001d006032 | PANTHER:PTHR35715 | PANTHER:PTHR35715:SF3 | ProteinID:ONM22576.1 |
| SEG:seg | UniParc:UPI000221AF8A | UniProt:A0A1D6ES63 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2:-:195797936..195798310
Molecular Weight (calculated)
14616.0 Da
IEP (calculated)
5.794
GRAVY (calculated)
-0.059
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVRIKAVVD RFVKELQEAL DTNIQDRIMK EREMQSYIEE CEREVAEQEV AWKAELSRRE VITVGPQLFF HSPVLELKQS VRVAPACVLY LPLMSWPMLP
101: IVDTFSFLQS MRVVRYRHTT LEVM
101: IVDTFSFLQS MRVVRYRHTT LEVM
001: MSLRIKLVVD KFVEELKQAL DADIQDRIMK EREMQSYIEE REREVAEREA AWKAELSRRE TEIARQEARL KMERENLEKE KSVLMGTASN QDNQDGALEI
101: TVSGEKYRCL RFSKAKK
101: TVSGEKYRCL RFSKAKK
Arabidopsis Description
At2g17350 [Source:UniProtKB/TrEMBL;Acc:Q8L8N3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.