CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014226.1-P	Field mustard	cytosol, plastid	99.41	99.41
CDY03579	Canola	cytosol, plastid	97.94	97.65
AT1G49910.1	Thale cress	cytosol	92.92	92.92
CDY42193	Canola	cytosol, plastid	86.43	86.18
CDX95434	Canola	cytosol, plastid	86.43	86.18
VIT_03s0091g00710.t01	Wine grape	cytosol	83.19	83.68
Solyc01g107160.2.1	Tomato	nucleus	82.3	82.06
PGSC0003DMT400066160	Potato	extracellular	82.01	81.76
Os03t0448600-01	Rice	cytosol	80.83	79.88
EER87819	Sorghum	cytosol	80.53	79.59
TraesCS4D01G245500.2	Wheat	cytosol, plastid	80.53	79.13
TraesCS4A01G058600.1	Wheat	cytosol, plastid	80.53	79.13
TraesCS4B01G246100.1	Wheat	cytosol	66.08	72.96
KRH35672	Soybean	cytosol	27.43	70.99
HORVU4Hr1G067810.1	Barley	plastid	80.24	68.0
Os07t0588500-00	Rice	cytosol	67.55	62.91
TraesCS2D01G193800.1	Wheat	cytosol	63.13	62.57
TraesCS2A01G194000.1	Wheat	cytosol	63.72	62.43
TraesCS2B01G212800.1	Wheat	cytosol	63.42	61.96
CDX79657	Canola	cytosol	5.31	36.73
GSMUA_Achr4P03390_001	Banana	extracellular	45.43	36.41
CDY44065	Canola	cytosol	32.45	34.92
CDY28548	Canola	cytosol	32.15	34.6
CDY39955	Canola	plastid	34.51	33.62
CDX67958	Canola	cytosol, plastid	34.22	33.53
CDX79362	Canola	cytosol, plastid	33.04	33.33
CDX87331	Canola	plastid	34.22	33.33
CDY72330	Canola	cytosol	9.73	33.0
CDY66129	Canola	plastid	33.33	32.66
CDY53220	Canola	plastid	33.33	32.66

Protein Annotations

MapMan:13.3.5.5.2	Gene3D:2.130.10.10	UniProt:A0A078J7K3	EnsemblPlants:CDY59371	ProteinID:CDY59371	ProteinID:CDY59371.1
InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00026012001	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR10971	PANTHER:PTHR10971:SF24	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0004EF4316	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:

Description

BnaA08g29630DBnaA08g29630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7K3]

Coordinates

chrLK033755:-:30828..33291

Molecular Weight (calculated)

37646.0 Da

IEP (calculated)

7.519

GRAVY (calculated)

-0.529

Length

339 amino acids

Sequence
(BLAST)

001: MTLVPSIGRE LSNPPSDGVS NLRFSNSSDH LLVSSWDKSV RLYDANADSM RGEFKHGGAV LDCCFHDDSS GFSASADHKV RRIDFSAGKE DILGMHDEPV
101: RCVEYSYAAG QVITGSWDRT IKCWDPRAAS GPERSQIGTY KQPERVNSLS LVGNHLVVAT AGRHVNIYDL RNMSQPEQRR ESSLKYQTRC VRCYPNGTGY
201: ALSSVEGRVS MEFFDLSEAA QAKKYAFKCH RKSEDGRDIV YPVNAIAFHP IYGTFATGGC DGFVNVWDGN NKKRLYQYSK YPTSIAALSF SRDGGLLAIA
301: SSYTFEEGDK PHEPDAIFVR NVNEIEVKPK PKVYPNPPA

Best Arabidopsis Sequence Match ( AT1G49910.1 )
(BLAST)

001: MTLVPAIGRE LSNPPSDGIS NLRFSNNSDH LLVSSWDKSV RLYDANGDLM RGEFKHGGAV LDCCFHDDSS GFSVCADTKV RRIDFNAGKE DVLGTHEKPV
101: RCVEYSYAAG QVITGSWDKT IKCWDPRGAS GTERTQIGTY MQPERVNSLS LVGNRLVVAT AGRHVNIYDL RNMSQPEQRR ESSLKYQTRC VRCYPNGTGY
201: ALSSVEGRVS MEFFDLSEAA QAKKYAFKCH RKSEDGRDIV YPVNAIAFHP IYGTFASGGC DGFVNIWDGN NKKRLYQYSK YPTSIAALSF SRDGGLLAVA
301: SSYTFEEGDK PHEPDAIFVR SVNEIEVKPK PKVYPNPPV

Arabidopsis Description

BUB3.2BUB3.2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7L6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.