Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G396600.1 | Wheat | mitochondrion | 88.82 | 88.82 |
| TraesCS5D01G406300.1 | Wheat | mitochondrion | 88.2 | 88.2 |
| TraesCS5B01G401600.1 | Wheat | mitochondrion | 87.89 | 87.89 |
| Zm00001d034081_P002 | Maize | cytosol, mitochondrion | 55.28 | 59.14 |
| OQU90950 | Sorghum | mitochondrion | 57.14 | 56.97 |
| Os03t0758700-01 | Rice | endoplasmic reticulum, plasma membrane | 44.72 | 48.98 |
| KRH70829 | Soybean | cytosol | 44.41 | 43.33 |
| GSMUA_Achr9P09460_001 | Banana | cytosol | 43.48 | 43.21 |
| KRH74957 | Soybean | cytosol | 44.1 | 43.03 |
| AT1G69400.1 | Thale cress | cytosol | 41.3 | 42.36 |
| CDY28548 | Canola | cytosol | 39.75 | 40.63 |
| CDY44065 | Canola | cytosol | 39.44 | 40.32 |
| PGSC0003DMT400072830 | Potato | cytosol | 40.37 | 40.0 |
| Solyc05g012720.2.1 | Tomato | nucleus | 34.16 | 39.57 |
| VIT_01s0113g00430.t01 | Wine grape | cytosol | 39.44 | 38.84 |
| Bra038307.1-P | Field mustard | plastid | 38.51 | 32.8 |
| HORVU4Hr1G067810.1 | Barley | plastid | 31.06 | 25.0 |
| HORVU3Hr1G056400.2 | Barley | cytosol, plastid | 25.16 | 20.3 |
| HORVU1Hr1G004960.1 | Barley | plastid | 25.16 | 19.8 |
Protein Annotations
| MapMan:13.3.5.5.2 | Gene3D:2.130.10.10 | UniProt:A0A287SET5 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:HORVU5Hr1G096830 | EnsemblPlants:HORVU5Hr1G096830.5 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR10971 | PANTHER:PTHR10971:SF17 | SMART:SM00320 | SUPFAM:SSF50978 |
| UniParc:UPI000B474116 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
Description
No Description!
Coordinates
chrchr5H:-:602282557..602288173
Molecular Weight (calculated)
35403.4 Da
IEP (calculated)
5.946
GRAVY (calculated)
-0.271
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRGLAADA GAVSRVRFAP SSNNLMVSSW DSGLRLYDAD KSILRLEANS EAALLDCCFK DESVAFAGGS DGCVIRYDLN LGAQDTVGLH DDVVVSTEFS
101: QVTSQLVTSS LDKKLFFWDT HTRSVNHNNS FKLDSVVVSL SVCGMYILVT DENDVYWYDM RNLTGPIKAK DSPLKHHIRC LCASAEWNGY VAGSMDGTVA
201: VKYFDHDVDN DMGYTFRCHP RSKDGNSSLV PINNIAIHPS KQTFVTGDNE GYAIAWDALS KKKLLEFPSF SGSVASMAYN HTGQLLAVAS NYTHQGADRG
301: LEVEGHQIFI ETTRDSKREK SP
101: QVTSQLVTSS LDKKLFFWDT HTRSVNHNNS FKLDSVVVSL SVCGMYILVT DENDVYWYDM RNLTGPIKAK DSPLKHHIRC LCASAEWNGY VAGSMDGTVA
201: VKYFDHDVDN DMGYTFRCHP RSKDGNSSLV PINNIAIHPS KQTFVTGDNE GYAIAWDALS KKKLLEFPSF SGSVASMAYN HTGQLLAVAS NYTHQGADRG
301: LEVEGHQIFI ETTRDSKREK SP
001: MSGDRLEFEN PIEDAVSRLR FSPQSNNLLV ASWDSYLRLY DVESSSLSLE LNSQAALLDC CFENESTSFT SGSDGFIRRY DLNAGTVDTI GRHDDISTSI
101: VYSYEKGEVI STGFDEKIKF WDTRQRESLV FSTDAGGAVG CVTVSGNNLV VCVDASMHIY DLRNLDEAFQ SYASQVEVPI RCITSVPYSR GYAVGSVDGR
201: VAVDFPNTSC SSEIKYSFRC HPKSRNGRLD GVCINAIEFS PCGSGTFVTG DNEGYVISWN AKSRRRLNEL PRYSNSIASL AFDHTGELLA IASSHTYQDA
301: KEKEEAPQVF IHRL
101: VYSYEKGEVI STGFDEKIKF WDTRQRESLV FSTDAGGAVG CVTVSGNNLV VCVDASMHIY DLRNLDEAFQ SYASQVEVPI RCITSVPYSR GYAVGSVDGR
201: VAVDFPNTSC SSEIKYSFRC HPKSRNGRLD GVCINAIEFS PCGSGTFVTG DNEGYVISWN AKSRRRLNEL PRYSNSIASL AFDHTGELLA IASSHTYQDA
301: KEKEEAPQVF IHRL
Arabidopsis Description
BUB3.3Mitotic checkpoint protein BUB3.3 [Source:UniProtKB/Swiss-Prot;Acc:F4I241]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.