Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0588600-01 | Rice | nucleus | 13.27 | 13.64 |
| Os08t0176800-01 | Rice | plastid | 16.37 | 10.82 |
| Os01t0635400-01 | Rice | cytosol, plastid | 15.04 | 9.88 |
| Os03t0448600-01 | Rice | cytosol | 14.6 | 9.62 |
| Os07t0588500-00 | Rice | cytosol | 15.04 | 9.34 |
| Os03t0758700-01 | Rice | endoplasmic reticulum, plasma membrane | 8.85 | 6.8 |
| VIT_00s0490g00010.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:4343765 | EMBL:AY395294 | ProteinID:BAC57746.1 | ProteinID:BAF22059.1 |
| ProteinID:BAT02419.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 | EnsemblPlantsGene:Os07g0588700 | EnsemblPlants:Os07t0588700-00 | PFAM:PF13912 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF328 | UniProt:Q84Z14 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0000004690 | RefSeq:XP_015647208.1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
ZINC FINGER PROTEIN 245Zinc finger, C2H2-type domain containing protein. (Os07t0588700-00)
Coordinates
chr7:+:23980540..23981251
Molecular Weight (calculated)
24484.5 Da
IEP (calculated)
7.291
GRAVY (calculated)
-0.204
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLNEKPLVP PLSPTPVDFR AHQVFPSKHH DFDTSKSRNI SGSVAIGSDS EEEYLATSLL MLAHGIRDET KDIRGMGDVK GVGVDTLELV KPSQRAYECS
101: VCGKVYWCYQ ALGGHMTCHR NLFAQVVAGD ELSSDRTMVV KGHKCSICRL EFPSGQALGG HMRVHYVGGV EGGSVKEKNV VKTKVTGALK LVLKDFDLNV
201: PVVATMVGDE AESSHSEAKA RMMTLP
101: VCGKVYWCYQ ALGGHMTCHR NLFAQVVAGD ELSSDRTMVV KGHKCSICRL EFPSGQALGG HMRVHYVGGV EGGSVKEKNV VKTKVTGALK LVLKDFDLNV
201: PVVATMVGDE AESSHSEAKA RMMTLP
001: MALDTLNSPT STTTTTAPPP FLRCLDETEP ENLESWTKRK RTKRHRIDQP NPPPSEEEYL ALCLLMLARG SSDHHSPPSD HHSLSPLSDH QKDYKCSVCG
101: KSFPSYQALG GHKTSHRKPV SVDVNNSNGT VTNNGNISNG LVGQSGKTHN CSICFKSFPS GQALGGHKRC HYDGGNGNSN GDNSHKFDLN LPADQVSDET
201: IGKSQLSGEE TKSVL
101: KSFPSYQALG GHKTSHRKPV SVDVNNSNGT VTNNGNISNG LVGQSGKTHN CSICFKSFPS GQALGGHKRC HYDGGNGNSN GDNSHKFDLN LPADQVSDET
201: IGKSQLSGEE TKSVL
Arabidopsis Description
At3g49930 [Source:UniProtKB/TrEMBL;Acc:Q9SN24]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.