Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0091g00710.t01 | Wine grape | cytosol | 5.26 | 0.3 |
| VIT_09s0002g09150.t01 | Wine grape | cytosol, plastid | 5.26 | 0.29 |
| VIT_12s0055g00900.t01 | Wine grape | cytosol, plastid | 5.26 | 0.29 |
| Os07t0588600-01 | Rice | nucleus | 0.0 | 0.0 |
| Os07t0588700-00 | Rice | cytosol | 0.0 | 0.0 |
| VIT_01s0113g00430.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_00s0490g00010 | EnsemblPlants:VIT_00s0490g00010.t01 | EnsemblPlantsGene:VIT_00s0490g00010 | ProteinID:CCB50143.1 | RefSeq:XP_003635375 | RefSeq:XP_003635375.1 |
| UniParc:UPI000210A3F8 | UniProt:F6HD48 | MapMan:35.2 | : | : | : |
Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6HD48]
Coordinates
chrUn:+:30477351..30477952
Molecular Weight (calculated)
2035.5 Da
IEP (calculated)
4.426
GRAVY (calculated)
-0.305
Length
19 amino acids
Sequence
(BLAST)
(BLAST)
1: MSAMGEEQIC ALKDIGPKN
001: MSDDEHHFES SDAGASKTYP QQAGNIRKGG HIVIKGRPCK VVEVSTSKTG KHGHAKCHFV AIDIFTSKKL EDIVPSSHNC DVPHVNRVDY QLIDISEDGF
101: VSLLTDNGST KDDLKLPTDE ALLTQLKNGF EEGKDIVVSV MSAMGEEQMC ALKEVGPK
101: VSLLTDNGST KDDLKLPTDE ALLTQLKNGF EEGKDIVVSV MSAMGEEQMC ALKEVGPK
Arabidopsis Description
ELF5A-3Eukaryotic translation initiation factor 5A-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C505]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.