Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0126300-01 | |
| Os02t0829900-01 | |
| Os03t0448600-01 | nucleus |
| Os04t0486500-01 | nucleus |
| Os05t0552900-01 | |
| Os07t0588500-00 | nucleus |
| Os11t0128700-00 | nucleus |
| Os12t0125300-01 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES06214 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 74.6 | 71.28 |
| Zm00001d015096_P002 | Maize | nucleus | 71.91 | 65.79 |
| Zm00001d053956_P001 | Maize | nucleus | 68.87 | 64.6 |
| TraesCSU01G016800.1 | Wheat | nucleus | 61.9 | 62.91 |
| TraesCS6A01G089500.2 | Wheat | nucleus | 61.36 | 62.59 |
| TraesCS6B01G111900.1 | Wheat | nucleus | 60.82 | 61.93 |
| Bra010069.1-P | Field mustard | nucleus | 40.61 | 42.12 |
| CDX86911 | Canola | nucleus | 40.61 | 42.12 |
| CDY00270 | Canola | nucleus | 40.43 | 41.93 |
| Bra035900.1-P | Field mustard | nucleus | 40.07 | 41.4 |
| CDY16786 | Canola | nucleus | 40.07 | 41.25 |
| CDX87240 | Canola | nucleus | 39.53 | 40.85 |
| VIT_15s0048g00860.t01 | Wine grape | cytosol, nucleus, plasma membrane | 43.65 | 40.73 |
| AT5G62250.1 | Thale cress | nucleus | 39.36 | 40.07 |
| Os01t0685900-01 | Rice | cytosol | 46.33 | 37.59 |
| KRH38719 | Soybean | cytosol | 43.11 | 37.42 |
| VIT_16s0022g01820.t01 | Wine grape | nucleus | 48.12 | 36.85 |
| PGSC0003DMT400079660 | Potato | cytosol | 49.02 | 36.78 |
| Bra023930.1-P | Field mustard | cytosol | 46.33 | 36.53 |
| Bra028266.1-P | Field mustard | cytosol | 46.15 | 36.49 |
| Os06t0611000-01 | Rice | nucleus | 37.92 | 36.49 |
| PGSC0003DMT400070431 | Potato | nucleus | 45.26 | 36.46 |
| Solyc03g007130.2.1 | Tomato | nucleus | 48.3 | 36.44 |
| AT5G51600.1 | Thale cress | cytosol | 45.98 | 36.35 |
| KRH34346 | Soybean | cytosol | 48.3 | 36.24 |
| KRG92454 | Soybean | nucleus | 47.05 | 36.18 |
| Os06t0308300-01 | Rice | golgi | 36.31 | 35.24 |
| Os05t0552900-01 | Rice | cytosol | 45.44 | 34.75 |
| Os02t0720200-01 | Rice | cytosol | 36.49 | 34.63 |
| Solyc11g072280.1.1 | Tomato | extracellular | 47.05 | 34.11 |
| Os05t0409400-01 | Rice | cytosol, nucleus, plastid | 36.49 | 33.77 |
| Os08t0531100-01 | Rice | cytosol | 29.34 | 33.61 |
| Os09t0450300-01 | Rice | nucleus | 35.06 | 32.94 |
| Os03t0237600-04 | Rice | nucleus | 35.78 | 32.79 |
| Bra014467.1-P | Field mustard | cytosol | 37.39 | 32.25 |
| AT3G60840.1 | Thale cress | cytosol | 38.64 | 31.91 |
| CDX89081 | Canola | cytosol | 39.0 | 31.78 |
| KRH09228 | Soybean | cytosol | 30.41 | 31.78 |
| CDY62713 | Canola | cytosol | 38.64 | 31.58 |
| KRH40591 | Soybean | nucleus | 39.36 | 31.38 |
| Solyc01g091380.2.1 | Tomato | plastid | 41.32 | 31.05 |
| Os03t0719000-01 | Rice | cytosol, nucleus | 26.12 | 30.93 |
| PGSC0003DMT400033224 | Potato | nucleus | 41.68 | 30.86 |
| Os01t0685800-01 | Rice | mitochondrion | 0.18 | 0.18 |
Protein Annotations
| Gene3D:1.20.58.1520 | MapMan:35.1 | EntrezGene:4328154 | EMBL:AK070676 | ProteinID:BAD08014.1 | ProteinID:BAF07664.1 |
| ProteinID:BAS76767.1 | ncoils:Coil | ProteinID:EAZ21583.1 | GO:GO:0000226 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP65_Ase1_PRC1 |
| EnsemblPlantsGene:Os02g0126300 | EnsemblPlants:Os02t0126300-01 | PFAM:PF03999 | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF13 | UniProt:Q6Z2N0 |
| UniParc:UPI0000236886 | RefSeq:XP_015624388.1 | SEG:seg | : | : | : |
Description
MAP65/ASE1 family protein. (Os02t0126300-01)
Coordinates
chr2:-:1379250..1382389
Molecular Weight (calculated)
64669.4 Da
IEP (calculated)
5.071
GRAVY (calculated)
-0.725
Length
559 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLKLRAIL FPFQMEPRRE MLLQELGEMW DQIGEAEEDR REMLHALEED CLNVYRVKVA QVKQYRAQLQ REIADSVAEV AAICATIGEP STTVHIACSS
101: LQSTGNLKEE LGSITPELEE MRRRREERRR KFSEVTELIN RIEQEMKPSK QLHLTMDNSD LTIRRLEELR AYLQDLQLEK DSRVRKMTEL MGSLHSSSLV
201: LGMDFRETNL HHDDEGDISD DAIARLVSEI GRLREIKRNR MQKLQDLLAT MLDLWNLMDT PSEEQKRFQS VACNIAASED EITERDALSM EFINNVEAEV
301: VRLERLKECR MKDLVLKKYD ELNEIRRRAH VPVENEDDAM MMFDAIDSDA KRSLILERLE VQISEAKDEE FSRKDVLEKM EKWQAALEEE SWLEEYNRNE
401: NRYNVGKGTH LVLKRAEKAR ALVSKMPAMA EALITKVIAW EKERGAKFEY DGDGLLDMLE EYNNTRKEKE QERKRQRDQR RMLGQGTGES PVVRPPPKNI
501: KNVTRTLSMG GTSTGGKKAS ASVSSRPSTP SFLKSPMSAR RSDEGQMLLS RAVEEDDLL
101: LQSTGNLKEE LGSITPELEE MRRRREERRR KFSEVTELIN RIEQEMKPSK QLHLTMDNSD LTIRRLEELR AYLQDLQLEK DSRVRKMTEL MGSLHSSSLV
201: LGMDFRETNL HHDDEGDISD DAIARLVSEI GRLREIKRNR MQKLQDLLAT MLDLWNLMDT PSEEQKRFQS VACNIAASED EITERDALSM EFINNVEAEV
301: VRLERLKECR MKDLVLKKYD ELNEIRRRAH VPVENEDDAM MMFDAIDSDA KRSLILERLE VQISEAKDEE FSRKDVLEKM EKWQAALEEE SWLEEYNRNE
401: NRYNVGKGTH LVLKRAEKAR ALVSKMPAMA EALITKVIAW EKERGAKFEY DGDGLLDMLE EYNNTRKEKE QERKRQRDQR RMLGQGTGES PVVRPPPKNI
501: KNVTRTLSMG GTSTGGKKAS ASVSSRPSTP SFLKSPMSAR RSDEGQMLLS RAVEEDDLL
001: MIRNSTEQFS RIETTCGLLL RQLQEIWNEM GETEDEKDAS LADIEKECLS VYKRKVEEAS RGKANLLKEI AVGRAEIAAI GSSMGGQEIH SNSRLGENLK
101: EELENVNVQL DGLRKRKAER MIRFNEVIDQ LLKLSLQLGN PTDYLKKFAA EETDLSLQRL EELRSQLGEL QNEKSKRLEE VECLLKTLNS LCSVLGEDFK
201: GMIRGIHSSL VDSNTRDVSR STLDKLDMMI VNLREAKLQR MQKVQDLAVS LLELWNLLDT PAEEQKIFHN VTCSIALTES EITEANILSV ASIKRVEDEV
301: IRLSKIKITK IKEVILRKRL ELEEISRKMH MATEVLKSEN FSVEAIESGV KDPEQLLEQI DSEIAKVKEE ASSRKEILEK VEKWMSACEE ESWLEEYNRD
401: DNRYNAGRGA HLTLKRAEKA RLLVNKLPGM VEALTAKVTA WENERGNEFL YDGVRVLSML GQYKTVWEEK EHEKQRQRDM KKLHGQLITE QEALYGSKPS
501: PNKSGKKPLR TPVNAAMNRK LSLGGAMLHQ SLKHEKATLN SKRTKYYDQN ATSRRDSALP TLSGRRNSEL PGRIRSKNVP VAGKAARSPM LRKPLSPVTS
601: NILNSPEDHH KDAYTTKERI LTPKTNEEKK RAVPTTPAAS VAMTEATTPF TPAVEKRMDE EDVIVEYSFE EVRAGFC
101: EELENVNVQL DGLRKRKAER MIRFNEVIDQ LLKLSLQLGN PTDYLKKFAA EETDLSLQRL EELRSQLGEL QNEKSKRLEE VECLLKTLNS LCSVLGEDFK
201: GMIRGIHSSL VDSNTRDVSR STLDKLDMMI VNLREAKLQR MQKVQDLAVS LLELWNLLDT PAEEQKIFHN VTCSIALTES EITEANILSV ASIKRVEDEV
301: IRLSKIKITK IKEVILRKRL ELEEISRKMH MATEVLKSEN FSVEAIESGV KDPEQLLEQI DSEIAKVKEE ASSRKEILEK VEKWMSACEE ESWLEEYNRD
401: DNRYNAGRGA HLTLKRAEKA RLLVNKLPGM VEALTAKVTA WENERGNEFL YDGVRVLSML GQYKTVWEEK EHEKQRQRDM KKLHGQLITE QEALYGSKPS
501: PNKSGKKPLR TPVNAAMNRK LSLGGAMLHQ SLKHEKATLN SKRTKYYDQN ATSRRDSALP TLSGRRNSEL PGRIRSKNVP VAGKAARSPM LRKPLSPVTS
601: NILNSPEDHH KDAYTTKERI LTPKTNEEKK RAVPTTPAAS VAMTEATTPF TPAVEKRMDE EDVIVEYSFE EVRAGFC
Arabidopsis Description
MAP65-465-kDa microtubule-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZY0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.