CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035900.1-P	Field mustard	nucleus	99.45	99.82
CDX87240	Canola	nucleus	94.84	95.19
CDY00270	Canola	nucleus	87.11	87.76
CDX86911	Canola	nucleus	86.92	87.57
AT5G62250.1	Thale cress	nucleus	85.82	84.88
Zm00001d030420_P001	Maize	cytosol	22.84	54.15
KRH38719	Soybean	cytosol	53.96	45.5
GSMUA_Achr5P11340_001	Banana	cytosol	53.59	43.63
GSMUA_Achr5P10040_001	Banana	nucleus	50.64	43.38
GSMUA_Achr1P02510_001	Banana	cytosol	53.04	42.67
VIT_16s0022g01820.t01	Wine grape	nucleus	56.72	42.19
KRG92454	Soybean	nucleus	55.99	41.82
TraesCS3B01G297900.1	Wheat	cytosol	52.49	41.3
TraesCS3D01G264700.2	Wheat	cytosol	52.3	41.16
KRH34346	Soybean	cytosol	56.35	41.07
TraesCS3A01G264600.1	Wheat	cytosol	51.93	40.93
PGSC0003DMT400070431	Potato	nucleus	51.57	40.35
Solyc03g007130.2.1	Tomato	nucleus	54.88	40.22
PGSC0003DMT400079660	Potato	cytosol	55.06	40.13
Os02t0126300-01	Rice	plasma membrane	41.25	40.07
KRH09228	Soybean	cytosol	39.41	40.0
OQU87349	Sorghum	golgi, vacuole	51.75	39.3
Zm00001d011615_P001	Maize	cytosol, nucleus, plastid	51.01	39.29
Solyc11g072280.1.1	Tomato	extracellular	54.14	38.13
CDY19902	Canola	cytosol	41.07	38.12
CDY17313	Canola	cytosol	40.88	37.95
CDY14300	Canola	nucleus	40.52	37.8
Zm00001d043831_P001	Maize	cytosol, mitochondrion	51.01	37.74
TraesCS1A01G378900.1	Wheat	cytosol	46.96	37.67
TraesCS1B01G400200.1	Wheat	cytosol	47.15	37.59
TraesCS1D01G386100.1	Wheat	cytosol	47.15	37.59
HORVU3Hr1G063620.1	Barley	plastid	51.57	37.53
CDX89305	Canola	cytosol	39.23	37.43
Zm00001d006888_P001	Maize	cytosol	18.23	37.08
HORVU1Hr1G083810.7	Barley	cytosol	46.41	36.84
CDY06596	Canola	cytosol	39.96	36.84
TraesCS6A01G089500.2	Wheat	nucleus	37.02	36.68
CDY20777	Canola	cytosol	39.78	36.67
TraesCSU01G016800.1	Wheat	nucleus	37.02	36.55
Os05t0552900-01	Rice	cytosol	49.17	36.53
TraesCS6B01G111900.1	Wheat	nucleus	36.83	36.43
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.67	35.9
Zm00001d053956_P001	Maize	nucleus	39.04	35.57
CDY36737	Canola	nucleus	40.52	34.92
CDY33748	Canola	cytosol	37.94	34.51
CDX81663	Canola	cytosol	37.94	34.45
CDY12006	Canola	cytosol	40.52	34.16
CDY17624	Canola	nucleus	37.75	33.72
CDX89081	Canola	cytosol	42.36	33.53
Zm00001d015096_P002	Maize	nucleus	37.57	33.39
CDY18372	Canola	nucleus	36.1	33.22
CDY62713	Canola	cytosol	41.8	33.19
CDX93308	Canola	nucleus	35.91	33.11
CDY03090	Canola	nucleus	37.57	32.85
CDX94287	Canola	nucleus	39.59	32.48
CDY27637	Canola	cytosol	34.07	32.46
CDX84899	Canola	extracellular, nucleus, plastid	34.07	32.23
CDY15798	Canola	endoplasmic reticulum, golgi	22.47	28.91
CDX97365	Canola	nucleus	40.33	27.04
Zm00001d046884_P001	Maize	plastid	23.39	26.46
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	20.44	19.51

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	GO:A0A078FUY6	UniProt:A0A078FUY6	EnsemblPlants:CDY16786	ProteinID:CDY16786
ProteinID:CDY16786.1	ncoils:Coil	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
EnsemblPlantsGene:GSBRNA2T00094665001	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF7	UniParc:UPI0004EDF292
SEG:seg	:	:	:	:	:

Description

BnaA09g05960DBnaA09g05960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUY6]

Coordinates

chrLK032067:-:366344..368655

Molecular Weight (calculated)

62844.4 Da

IEP (calculated)

5.028

GRAVY (calculated)

-0.833

Length

543 amino acids

Sequence
(BLAST)

001: MSKTQIESFS ASLLQELEII WDEVGETKTE REKILNEIED ECRNIYIGKI EKVKEERSRL RQDIVDSEAR VIDICSVMEE PSGPGRQQQS DQCGRNLKEE
101: LGKILLKLED MEKRKSERKN QFIQVIEDIK CVRDEINGES DETCSSDFPV DESDLSLRKL EELHRELYTL QEQKRNRMKQ IQDHLRTLES LCSVLGLNFR
201: ETVTKIHPSL VESEGSRSIS NTTLDKLASS VNQWHETKIQ RMQELQDLVT TMLGFWNLMD TPAEEQQKFM SISCNIAATA SEITKPNSLS TDLLEEVKAE
301: VCRLEELKWS KMKELVLKKR SELEEICKRT HIVLEEQDIA VENVIKAIES GDVNPENILE HIEYRAGKVK EEALSRKEIL EKTEKWLNAC EEETWLEEYN
401: QDENRYNAGK GSHLILKRAE KARALVNKLP AMAEALVSKI TTWESETEAE FLFDGNRLLS MLEEYIDTEL KEEKEQERRR RRELKKLQGQ VTPEQDKGTP
501: TKHQSAKKSL KVSTNKRFGS SPQTPRSDSP HSAKSFTSQS RHA

Best Arabidopsis Sequence Match ( AT5G62250.1 )
(BLAST)

001: MSKSQIESTW SSLLQELEII WKEVGETETE REKILIEIEE ECREVYNRKI EKVKEEKIRI KQEIADSEAR VIDICSVMEE PPILGRHHQS DQQSGNGRSL
101: KDELVKILQK LEEMEKRKSE RKIQFIQVID DIRCVREEIN GESDDETCSS DFSADESDLS LRKLEELHRE LYTLQEQKRN RVKQIQDNIR TLESLCSVLG
201: LNFRETVTKI HPSLVDTEGS RSISNETLDK LASSVQQWHE TKIQRMQELQ DLVTTMLEFW NLMDTPAEEQ QKFMDVSCNI AATVSEITKP NSLSIDLLEE
301: VKAELCRLEE LKWSKMKELV LKKRSELEEI CRRTHIVLEE EDIAVENVIK AIESGDVNPE NILEQIEYRA GKVKEEALSR KEILEKADKW LNACEEENWL
401: EEYNQDENRY NAGKGSHLIL KRAEKARALV NKLPAMVEAL ASKITIWESE KEYEFLFDGN RLLSMLEEYT ELREEKEQER RRKRDLKKHQ GQVTSEQDKG
501: SVTKPQSAKK GLKVSTNKRF VSSPHTPQTD SPHSAKSNQS FSTPLSRHG

Arabidopsis Description

MAP65-965-kDa microtubule-associated protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSA3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.