Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20777 | Canola | cytosol | 95.42 | 95.42 |
| CDY19902 | Canola | cytosol | 89.3 | 89.91 |
| CDY17313 | Canola | cytosol | 89.13 | 89.74 |
| AT5G55230.2 | Thale cress | cytosol | 88.45 | 84.58 |
| CDY36737 | Canola | nucleus | 89.13 | 83.33 |
| CDY12006 | Canola | cytosol | 88.79 | 81.21 |
| CDY14300 | Canola | nucleus | 77.42 | 78.35 |
| CDX89305 | Canola | cytosol | 73.85 | 76.45 |
| KRH73815 | Soybean | cytosol | 74.02 | 74.91 |
| KRH14311 | Soybean | endoplasmic reticulum | 74.02 | 73.9 |
| VIT_19s0090g01230.t01 | Wine grape | endoplasmic reticulum | 66.21 | 69.64 |
| KRH14315 | Soybean | cytosol, endoplasmic reticulum | 70.46 | 69.63 |
| PGSC0003DMT400057428 | Potato | cytosol | 68.42 | 69.36 |
| Solyc07g064970.2.1 | Tomato | nucleus | 68.42 | 69.36 |
| PGSC0003DMT400033471 | Potato | cytosol | 67.06 | 68.82 |
| KRG98677 | Soybean | cytosol | 51.1 | 68.56 |
| GSMUA_Achr3P13450_001 | Banana | cytosol | 68.42 | 68.42 |
| Solyc12g014490.1.1 | Tomato | cytosol | 65.53 | 68.08 |
| GSMUA_Achr7P06200_001 | Banana | cytosol | 67.4 | 67.52 |
| GSMUA_Achr4P19380_001 | Banana | cytosol | 66.89 | 67.24 |
| GSMUA_Achr4P03890_001 | Banana | cytosol | 66.72 | 67.06 |
| CDX94287 | Canola | nucleus | 72.84 | 64.8 |
| KRH46253 | Soybean | nucleus | 34.3 | 64.13 |
| Os06t0308300-01 | Rice | golgi | 61.63 | 63.02 |
| Os06t0611000-01 | Rice | nucleus | 61.46 | 62.31 |
| TraesCS7D01G399400.1 | Wheat | cytosol | 61.29 | 62.24 |
| TraesCS7B01G304900.2 | Wheat | cytosol | 60.95 | 61.9 |
| EER89674 | Sorghum | cytosol | 61.97 | 61.66 |
| HORVU7Hr1G094860.1 | Barley | cytosol | 60.61 | 61.55 |
| TraesCS7A01G405500.1 | Wheat | cytosol | 60.61 | 61.55 |
| EER88641 | Sorghum | cytosol | 60.1 | 61.03 |
| TraesCS7D01G224800.1 | Wheat | cytosol | 60.1 | 60.82 |
| TraesCS7A01G223100.1 | Wheat | cytosol, nucleus, plastid | 60.44 | 60.03 |
| HORVU7Hr1G045770.7 | Barley | endoplasmic reticulum | 60.27 | 58.01 |
| TraesCS7B01G190000.1 | Wheat | endoplasmic reticulum, golgi | 60.44 | 57.89 |
| TraesCS6D01G263300.1 | Wheat | cytosol | 57.22 | 57.41 |
| HORVU6Hr1G070900.6 | Barley | cytosol | 57.05 | 56.95 |
| TraesCS6A01G282800.1 | Wheat | cytosol | 56.71 | 56.9 |
| CDX97365 | Canola | nucleus | 77.59 | 56.42 |
| Zm00001d037413_P002 | Maize | cytosol | 60.27 | 56.26 |
| TraesCS6B01G311200.1 | Wheat | cytosol | 56.37 | 56.18 |
| Os02t0720200-01 | Rice | cytosol | 55.69 | 55.69 |
| Zm00001d045864_P004 | Maize | mitochondrion | 59.93 | 52.14 |
| CDX81663 | Canola | cytosol | 44.31 | 43.65 |
| CDY17624 | Canola | nucleus | 44.99 | 43.59 |
| CDY33748 | Canola | cytosol | 43.29 | 42.71 |
| CDY00270 | Canola | nucleus | 38.2 | 41.74 |
| CDX86911 | Canola | nucleus | 38.03 | 41.56 |
| CDY03090 | Canola | nucleus | 43.46 | 41.22 |
| CDY18372 | Canola | nucleus | 41.26 | 41.19 |
| CDX93308 | Canola | nucleus | 41.09 | 41.09 |
| CDX84899 | Canola | extracellular, nucleus, plastid | 39.9 | 40.94 |
| CDY27637 | Canola | cytosol | 39.39 | 40.7 |
| CDY16786 | Canola | nucleus | 36.84 | 39.96 |
| CDX87240 | Canola | nucleus | 36.67 | 39.93 |
| CDY15798 | Canola | endoplasmic reticulum, golgi | 28.18 | 39.34 |
| CDY62713 | Canola | cytosol | 39.22 | 33.77 |
| CDX89081 | Canola | cytosol | 38.37 | 32.94 |
| CDY09401 | Canola | endoplasmic reticulum, golgi, plasma membrane | 21.73 | 22.5 |
Protein Annotations
| EnsemblPlants:CDY06596 | EnsemblPlantsGene:GSBRNA2T00122733001 | Gene3D:1.20.58.1520 | GO:A0A078EZM0 | GO:GO:0000226 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| InterPro:MAP65_Ase1_PRC1 | ncoils:Coil | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF15 | PFAM:PF03999 | ProteinID:CDY06596 |
| ProteinID:CDY06596.1 | SEG:seg | UniParc:UPI0004EE301E | MapMan:13.4.3.6 | : | : |
Description
BnaC02g13200D
Coordinates
chrLK031971:-:609405..612678
Molecular Weight (calculated)
65668.2 Da
IEP (calculated)
4.791
GRAVY (calculated)
-0.616
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVTDAESPH LGEITCGTLL QKLQEIWDEV GESDGQRDKM LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TTSLGDKTFA NGIPDKSHGT
101: IKEQLAAIAP ALEQLWQQKE ERVRDFSDVQ SQIQKISGEI AGGLSNNELP LPPIVDESDL SLKKLDSFHS QLQELQKEKS ERLQKVLEFV STVHDLCAVL
201: SLDFLTTVTQ VHPSLDEETG VQAKSISNDT LSMLAKTVST LEDDKKQRLQ KLQDLATQLI DLWNLMDTPE EERDLFNHVT CNISSSVDDV TTPGALARDL
301: IKEAEVEVDR LDQLKASRMK EIAFKKETEL EEIYARAHVE INPESARERI MSLIDAGNVE HTELLADMDG QIAKAREEAV SRKDVLDRVE KWISACEEES
401: WLEDYNRDHN RYSASRGAHL NLKRAEKARI LVSKIPAMVD TLVAKIRAWE EEHSMSFAYD GVPLLAMLDE YGMLRQERED EKRRLREQKK VQEQPHVEQD
501: SAFSTRPSPA ARPVSAKKPV GTRANNGGAN RRLSLNANQN GSRSIAKEGG RRESLNRPAA PTNYVAISKE EAASSSPGSG AADQVSASP
101: IKEQLAAIAP ALEQLWQQKE ERVRDFSDVQ SQIQKISGEI AGGLSNNELP LPPIVDESDL SLKKLDSFHS QLQELQKEKS ERLQKVLEFV STVHDLCAVL
201: SLDFLTTVTQ VHPSLDEETG VQAKSISNDT LSMLAKTVST LEDDKKQRLQ KLQDLATQLI DLWNLMDTPE EERDLFNHVT CNISSSVDDV TTPGALARDL
301: IKEAEVEVDR LDQLKASRMK EIAFKKETEL EEIYARAHVE INPESARERI MSLIDAGNVE HTELLADMDG QIAKAREEAV SRKDVLDRVE KWISACEEES
401: WLEDYNRDHN RYSASRGAHL NLKRAEKARI LVSKIPAMVD TLVAKIRAWE EEHSMSFAYD GVPLLAMLDE YGMLRQERED EKRRLREQKK VQEQPHVEQD
501: SAFSTRPSPA ARPVSAKKPV GTRANNGGAN RRLSLNANQN GSRSIAKEGG RRESLNRPAA PTNYVAISKE EAASSSPGSG AADQVSASP
001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQVI
301: YIALINLPMS SLRNQLLLAN IHVKFVKAEV EVDRLDQLKA SRMKEIAFKK QSELEEIYAR AHVEVNPESA RERIMSLIDS GNVEPTELLA DMDSQISKAK
401: EEAFSRKDIL DRVEKWMSAC EEESWLEDYN RDQNRYSASR GAHLNLKRAE KARILVSKIP AMVDTLVAKT RAWEEEHSMS FAYDGVPLLA MLDEYGMLRQ
501: EREEEKRRLR EQKKVQEQPH VEQESAFSTR PSPARPVSAK KTVGPRANNG GANGTHNRRL SLNANQNGSR STAKEAGRRE TLNRPAAPTN YVAISKEEAA
601: SSPVSGAADH QVPASP
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQVI
301: YIALINLPMS SLRNQLLLAN IHVKFVKAEV EVDRLDQLKA SRMKEIAFKK QSELEEIYAR AHVEVNPESA RERIMSLIDS GNVEPTELLA DMDSQISKAK
401: EEAFSRKDIL DRVEKWMSAC EEESWLEDYN RDQNRYSASR GAHLNLKRAE KARILVSKIP AMVDTLVAKT RAWEEEHSMS FAYDGVPLLA MLDEYGMLRQ
501: EREEEKRRLR EQKKVQEQPH VEQESAFSTR PSPARPVSAK KTVGPRANNG GANGTHNRRL SLNANQNGSR STAKEAGRRE TLNRPAAPTN YVAISKEEAA
601: SSPVSGAADH QVPASP
Arabidopsis Description
ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.