Factsheet for Solyc12g014490.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033471	Potato	cytosol	92.59	91.46
Solyc07g064970.2.1	Tomato	nucleus	82.36	80.38
KRH73815	Soybean	cytosol	75.66	73.71
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	71.6	72.5
KRH14311	Soybean	endoplasmic reticulum	74.78	71.86
GSMUA_Achr7P06200_001	Banana	cytosol	71.78	69.22
GSMUA_Achr4P19380_001	Banana	cytosol	71.43	69.11
GSMUA_Achr3P13450_001	Banana	cytosol	70.37	67.74
KRH14315	Soybean	cytosol, endoplasmic reticulum	70.9	67.45
CDY17313	Canola	cytosol	69.49	67.35
GSMUA_Achr4P03890_001	Banana	cytosol	69.49	67.24
Bra002922.1-P	Field mustard	cytosol	69.31	67.18
CDY19902	Canola	cytosol	69.31	67.18
Bra028986.1-P	Field mustard	cytosol	69.49	67.01
KRG98677	Soybean	cytosol	51.15	66.06
CDY20777	Canola	cytosol	68.25	65.7
Bra035564.1-P	Field mustard	cytosol	67.9	65.59
CDY06596	Canola	cytosol	68.08	65.53
CDY14300	Canola	nucleus	67.02	65.29
AT4G26760.1	Thale cress	cytosol	66.49	65.22
Bra010428.1-P	Field mustard	cytosol	66.84	65.12
Bra026405.1-P	Field mustard	cytosol	65.26	65.03
CDX89305	Canola	cytosol	65.08	64.85
AT5G55230.2	Thale cress	cytosol	70.19	64.61
Os06t0308300-01	Rice	golgi	65.26	64.24
CDY36737	Canola	nucleus	69.84	62.86
KRH46253	Soybean	nucleus	34.74	62.54
Os06t0611000-01	Rice	nucleus	63.49	61.96
EER89674	Sorghum	cytosol	64.55	61.82
TraesCS7D01G224800.1	Wheat	cytosol	62.79	61.17
TraesCS7D01G399400.1	Wheat	cytosol	62.43	61.03
CDY12006	Canola	cytosol	69.31	61.02
TraesCS7A01G405500.1	Wheat	cytosol	62.26	60.86
TraesCS7B01G304900.2	Wheat	cytosol	62.08	60.69
HORVU7Hr1G094860.1	Barley	cytosol	61.9	60.52
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	62.96	60.2
EER88641	Sorghum	cytosol	60.32	58.97
HORVU7Hr1G045770.7	Barley	endoplasmic reticulum	62.96	58.33
TraesCS7B01G190000.1	Wheat	endoplasmic reticulum, golgi	63.14	58.21
HORVU6Hr1G070900.6	Barley	cytosol	60.49	58.14
TraesCS6A01G282800.1	Wheat	cytosol	60.14	58.09
TraesCS6D01G263300.1	Wheat	cytosol	60.14	58.09
TraesCS6B01G311200.1	Wheat	cytosol	60.14	57.7
Zm00001d037413_P002	Maize	cytosol	63.67	57.21
Os02t0720200-01	Rice	cytosol	59.08	56.88
CDX94287	Canola	nucleus	64.73	55.44
Zm00001d045864_P004	Maize	mitochondrion	62.79	52.58
CDX97365	Canola	nucleus	66.49	46.54
Solyc01g096680.2.1	Tomato	nucleus	45.33	45.17
Solyc05g015320.2.1	Tomato	extracellular	47.27	45.04
Solyc01g005080.2.1	Tomato	cytosol	42.15	42.75
Solyc04g008290.2.1	Tomato	nucleus	44.44	42.0
Solyc03g007130.2.1	Tomato	nucleus	47.09	36.03
Solyc11g072280.1.1	Tomato	extracellular	46.38	34.11
Solyc01g091380.2.1	Tomato	plastid	41.45	31.59

Protein Annotations

EnsemblPlants:Solyc12g014490.1.1	EnsemblPlantsGene:Solyc12g014490.1	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF15	PFAM:PF03999
UniParc:UPI000276A7DF	UniProt:K4DCY4	MapMan:13.4.3.6	:	:	:

Description

No Description!

Coordinates

chr12:+:5460179..5464117

Molecular Weight (calculated)

64127.9 Da

IEP (calculated)

5.052

GRAVY (calculated)

-0.611

Length

567 amino acids

Sequence
(BLAST)

001: MAAVDADQNG ETSCSFLLQQ LQQIWDEVGE TDEDRDKMLL QIDQECLDVY NRKVDQAVKS RDHLLQALAD AKVEFSRLLS ALGQKTYDGI PEKKLGSIKE
101: QLAAIAPALE KLWKQKDERV IKFLDVQSQI KKISSEIAGS SEQVETPKVD ESDLSLKKLD EFHAQLQDLQ KEKSERLHKV LKFVSAIHDL CAVLGIDFFS
201: TATEVHPSLN DSTGVQSKSI SNDTLSSLAR TVLALEEDKK QRLQKLQELA TQLIDLWNLM DTTEEEQSLF DHVTCNKSAS VDEVSIPGAL ALDLIEQAEV
301: EVERLDQLKA SRMKEIAFKK QAVLEEIFVC SHIEIDSEAS QHKIMALIDS GNIQPAELLA DMDNQIVKAK EEAESRKEIL DKVEKWMAAC EEESWLEDYN
401: RDQNRYNASR GAHLNLKRAE KARILVGKIP ALVDSLTTKT RAWEQDCDTT FTYDGVPLLS MLDEYMMLRH DREEEKRRLR DQKKFHEQIK EQETPFGSTP
501: IPSRPLGTKK VVGPRANGSG NRRLSLNSHQ NGSRPSTTKD GRRDHSRTVA PVNYVAISKD EHIPSTP

Best Arabidopsis Sequence Match ( AT5G55230.1 )
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQAE
301: VEVDRLDQLK ASRMKEIAFK KQSELEEIYA RAHVEVNPES ARERIMSLID SGNVEPTELL ADMDSQISKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI PAMVDTLVAK TRAWEEEHSM SFAYDGVPLL AMLDEYGMLR QEREEEKRRL REQKKVQEQP HVEQESAFST
501: RPSPARPVSA KKTVGPRANN GGANGTHNRR LSLNANQNGS RSTAKEAGRR ETLNRPAAPT NYVAISKEEA ASSPVSGAAD HQVPASP

Arabidopsis Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.