Factsheet for Bra028986.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002922.1-P	Field mustard	cytosol	92.01	92.48
CDY36737	Canola	nucleus	97.62	91.11
Bra035564.1-P	Field mustard	cytosol	88.1	88.25
AT5G55230.2	Thale cress	cytosol	92.18	87.99
CDY12006	Canola	cytosol	95.75	87.42
Bra010428.1-P	Field mustard	cytosol	79.76	80.58
Bra026405.1-P	Field mustard	cytosol	75.85	78.38
KRH73815	Soybean	cytosol	75.85	76.63
KRH14311	Soybean	endoplasmic reticulum	75.17	74.92
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	69.73	73.21
Solyc07g064970.2.1	Tomato	nucleus	70.07	70.91
PGSC0003DMT400057428	Potato	cytosol	70.07	70.91
KRH14315	Soybean	cytosol, endoplasmic reticulum	71.43	70.47
GSMUA_Achr3P13450_001	Banana	cytosol	70.41	70.29
GSMUA_Achr4P19380_001	Banana	cytosol	69.9	70.14
PGSC0003DMT400033471	Potato	cytosol	68.37	70.03
KRG98677	Soybean	cytosol	52.21	69.93
GSMUA_Achr7P06200_001	Banana	cytosol	69.56	69.56
Solyc12g014490.1.1	Tomato	cytosol	67.01	69.49
GSMUA_Achr4P03890_001	Banana	cytosol	68.88	69.11
Os06t0308300-01	Rice	golgi	63.78	65.1
KRH46253	Soybean	nucleus	34.86	65.08
Os06t0611000-01	Rice	nucleus	63.95	64.72
TraesCS7D01G399400.1	Wheat	cytosol	63.61	64.48
TraesCS7B01G304900.2	Wheat	cytosol	63.27	64.14
HORVU7Hr1G094860.1	Barley	cytosol	62.93	63.79
TraesCS7A01G405500.1	Wheat	cytosol	62.93	63.79
EER89674	Sorghum	cytosol	63.95	63.51
TraesCS7D01G224800.1	Wheat	cytosol	62.41	63.06
EER88641	Sorghum	cytosol	61.73	62.59
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	62.41	61.89
HORVU7Hr1G045770.7	Barley	endoplasmic reticulum	62.24	59.8
TraesCS7B01G190000.1	Wheat	endoplasmic reticulum, golgi	62.41	59.67
TraesCS6D01G263300.1	Wheat	cytosol	58.33	58.43
Zm00001d037413_P002	Maize	cytosol	62.24	58.0
TraesCS6A01G282800.1	Wheat	cytosol	57.82	57.92
HORVU6Hr1G070900.6	Barley	cytosol	57.99	57.8
Os02t0720200-01	Rice	cytosol	57.82	57.73
TraesCS6B01G311200.1	Wheat	cytosol	57.48	57.19
Zm00001d045864_P004	Maize	mitochondrion	61.9	53.77
Bra017106.1-P	Field mustard	nucleus	41.5	44.44
Bra024843.1-P	Field mustard	nucleus	45.92	44.41
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	44.9	44.37
Bra010069.1-P	Field mustard	nucleus	38.27	41.74
Bra035900.1-P	Field mustard	nucleus	37.07	40.3
Bra032853.1-P	Field mustard	cytosol	39.63	38.58
Bra023930.1-P	Field mustard	cytosol	43.88	36.39
Bra028266.1-P	Field mustard	cytosol	43.54	36.21
Bra014467.1-P	Field mustard	cytosol	37.24	33.8
Bra026625.1-P	Field mustard	mitochondrion	17.86	27.34

Protein Annotations

EnsemblPlants:Bra028986.1	EnsemblPlants:Bra028986.1-P	EnsemblPlantsGene:Bra028986	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF15
PFAM:PF03999	SEG:seg	UniParc:UPI000253FE7C	UniProt:M4EJM0	MapMan:13.4.3.6	:

Description

AT5G55230 (E=3e-279) ATMAP65-1, MAP65-1 | ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1); microtubule binding

Coordinates

chrA03:-:5724462..5727027

Molecular Weight (calculated)

65824.4 Da

IEP (calculated)

4.716

GRAVY (calculated)

-0.629

Length

588 amino acids

Sequence
(BLAST)

001: MVTDTESTHL GEITCGTLLQ KLQEIWDEVG ESDEERDKLL LQIEQECLHV YKRKVEQAAK SRAELLQTLS DANAELSSLT TSLGDKTFVN DIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKDE RVREFSDVQS QIQKICGEIA GGLSSEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLQK VLEFVSSVHD LCAVLGLDFL
201: NTVTEVHPSL DEETGVEAKS ISNETLSRLA KTVLALKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISA SVDEVTKPGA LAHDLIKQAE
301: VEVDRLDQLK ASRMKEIAFK KQTELEEIYV RAHVETNPES ARERIMSLID SGNVEPTELL ADMDSQIAKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARVLVSKI PAMVDTLVAK TRAWEEEHNM SFAYDGVPLL AMFDECGMLR QEREDEKRRL REQKKVQEQP HVEQDTAFST
501: RPSPARPVSA KKPVGARANN GVGANGTPNR RLSLNANQNG SRSVAKEGGR RESLNRPAAP TNYVAISKEE AASSPPVSGA VDQVPASP

Best Arabidopsis Sequence Match ( AT5G55230.1 )
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQAE
301: VEVDRLDQLK ASRMKEIAFK KQSELEEIYA RAHVEVNPES ARERIMSLID SGNVEPTELL ADMDSQISKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI PAMVDTLVAK TRAWEEEHSM SFAYDGVPLL AMLDEYGMLR QEREEEKRRL REQKKVQEQP HVEQESAFST
501: RPSPARPVSA KKTVGPRANN GGANGTHNRR LSLNANQNGS RSTAKEAGRR ETLNRPAAPT NYVAISKEEA ASSPVSGAAD HQVPASP

Arabidopsis Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.