Factsheet for Bra035900.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16786	Canola	nucleus	99.82	99.45
Bra010069.1-P	Field mustard	nucleus	87.25	87.57
AT5G62250.1	Thale cress	nucleus	85.95	84.7
Zm00001d030420_P001	Maize	cytosol	22.92	54.15
KRH38719	Soybean	cytosol	54.34	45.65
GSMUA_Achr5P11340_001	Banana	cytosol	53.79	43.63
GSMUA_Achr5P10040_001	Banana	nucleus	50.83	43.38
GSMUA_Achr1P02510_001	Banana	cytosol	53.23	42.67
VIT_16s0022g01820.t01	Wine grape	nucleus	56.93	42.19
Bra023930.1-P	Field mustard	cytosol	55.08	42.03
Bra028266.1-P	Field mustard	cytosol	54.9	42.01
KRG92454	Soybean	nucleus	56.38	41.95
TraesCS3B01G297900.1	Wheat	cytosol	52.68	41.3
KRH34346	Soybean	cytosol	56.75	41.21
TraesCS3D01G264700.2	Wheat	cytosol	52.5	41.16
TraesCS3A01G264600.1	Wheat	cytosol	52.13	40.93
PGSC0003DMT400070431	Potato	nucleus	51.76	40.35
Solyc03g007130.2.1	Tomato	nucleus	55.08	40.22
KRH09228	Soybean	cytosol	39.74	40.19
PGSC0003DMT400079660	Potato	cytosol	55.27	40.13
Os02t0126300-01	Rice	plasma membrane	41.4	40.07
OQU87349	Sorghum	golgi, vacuole	51.94	39.3
Zm00001d011615_P001	Maize	cytosol, nucleus, plastid	51.2	39.29
Solyc11g072280.1.1	Tomato	extracellular	54.34	38.13
Bra002922.1-P	Field mustard	cytosol	41.04	37.95
Bra026405.1-P	Field mustard	cytosol	39.74	37.79
Zm00001d043831_P001	Maize	cytosol, mitochondrion	51.2	37.74
TraesCS1A01G378900.1	Wheat	cytosol	47.13	37.67
TraesCS1D01G386100.1	Wheat	cytosol	47.32	37.59
TraesCS1B01G400200.1	Wheat	cytosol	47.32	37.59
HORVU3Hr1G063620.1	Barley	plastid	51.76	37.53
Bra010428.1-P	Field mustard	cytosol	40.3	37.46
Zm00001d006888_P001	Maize	cytosol	18.3	37.08
Bra028986.1-P	Field mustard	cytosol	40.3	37.07
HORVU1Hr1G083810.7	Barley	cytosol	46.58	36.84
TraesCS6A01G089500.2	Wheat	nucleus	37.15	36.68
TraesCSU01G016800.1	Wheat	nucleus	37.15	36.55
Os05t0552900-01	Rice	cytosol	49.35	36.53
TraesCS6B01G111900.1	Wheat	nucleus	36.97	36.43
Bra035564.1-P	Field mustard	cytosol	39.19	36.12
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.82	35.9
Bra017106.1-P	Field mustard	nucleus	36.23	35.7
Zm00001d053956_P001	Maize	nucleus	39.19	35.57
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	38.26	34.79
Bra014467.1-P	Field mustard	cytosol	40.48	33.8
Bra024843.1-P	Field mustard	nucleus	37.89	33.72
Zm00001d015096_P002	Maize	nucleus	37.71	33.39
Bra032853.1-P	Field mustard	cytosol	33.83	30.3
Zm00001d046884_P001	Maize	plastid	23.48	26.46
Bra026625.1-P	Field mustard	mitochondrion	16.08	22.66

Protein Annotations

EnsemblPlants:Bra035900.1	EnsemblPlants:Bra035900.1-P	EnsemblPlantsGene:Bra035900	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF7
PFAM:PF03999	SEG:seg	UniParc:UPI0002542093	UniProt:M4F4A0	MapMan:35.1	:

Description

AT5G62250 (E=3e-237) MAP65-9 | MAP65-9 (MICROTUBULE-ASSOCIATED PROTEIN 65-9)

Coordinates

chrA09:+:3002937..3005226

Molecular Weight (calculated)

62600.1 Da

IEP (calculated)

5.071

GRAVY (calculated)

-0.844

Length

541 amino acids

Sequence
(BLAST)

001: MSKTQIESFS ASLLQELEII WDEVGETKTE REKILNEIED ECRNIYIGKI EKVKEERSRL RQDIVDSEAR VIDICSVMEE PSGPGRQQQS DQCGRNLKEE
101: LGKILLKLED MEKRKSERKN QFIQVIEDIK SVRDEINGES DETCSSDFPV DESDLSLRKL EELHRELYTL QEQKRNRMKQ IQDHLRTLES LCSVLGLNFR
201: ETVTKIHPSL VESEGSRSIS NTTLDKLASS VNQWHETKIQ RMQELQDLVT TMLGFWNLMD TPAEEQQKFM SISCNIAATA SEITKPNSLS TDLLEEVKAE
301: VCRLEELKWS KMKELVLKKR SELEEICKRT HIVLEEQDIA VENVIKAIES GDVNPENILE HIEYRAGKVK EEALSRKEIL EKTEKWLNAC EEETWLEEYN
401: QDENRYNAGK GSHLILKRAE KARALVNKLP AMAEALVSKI TTWESETEAE FLFDGNRLLS MLEEYTELKE EKEQERRRRR ELKKLQGQVT PEQDKGTPTK
501: HQSAKKSLKV STNKRFGSSP QTPRSDSPHS AKSFTSQSRH A

Best Arabidopsis Sequence Match ( AT5G62250.1 )
(BLAST)

001: MSKSQIESTW SSLLQELEII WKEVGETETE REKILIEIEE ECREVYNRKI EKVKEEKIRI KQEIADSEAR VIDICSVMEE PPILGRHHQS DQQSGNGRSL
101: KDELVKILQK LEEMEKRKSE RKIQFIQVID DIRCVREEIN GESDDETCSS DFSADESDLS LRKLEELHRE LYTLQEQKRN RVKQIQDNIR TLESLCSVLG
201: LNFRETVTKI HPSLVDTEGS RSISNETLDK LASSVQQWHE TKIQRMQELQ DLVTTMLEFW NLMDTPAEEQ QKFMDVSCNI AATVSEITKP NSLSIDLLEE
301: VKAELCRLEE LKWSKMKELV LKKRSELEEI CRRTHIVLEE EDIAVENVIK AIESGDVNPE NILEQIEYRA GKVKEEALSR KEILEKADKW LNACEEENWL
401: EEYNQDENRY NAGKGSHLIL KRAEKARALV NKLPAMVEAL ASKITIWESE KEYEFLFDGN RLLSMLEEYT ELREEKEQER RRKRDLKKHQ GQVTSEQDKG
501: SVTKPQSAKK GLKVSTNKRF VSSPHTPQTD SPHSAKSNQS FSTPLSRHG

Arabidopsis Description

MAP65-965-kDa microtubule-associated protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSA3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.