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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G378900.1
TraesCS1B01G400200.1
TraesCS1D01G386100.1
TraesCS2A01G194000.1 nucleus
TraesCS2A01G196600.1
TraesCS2A01G320000.1 nucleus
TraesCS2B01G212800.1 nucleus
TraesCS2B01G224200.1
TraesCS2B01G363300.1 nucleus
TraesCS2D01G193800.1 nucleus
TraesCS2D01G204600.1
TraesCS2D01G343300.1 nucleus
TraesCS3A01G264600.1
TraesCS3B01G297900.1
TraesCS3D01G264700.2
TraesCS4A01G058600.1 nucleus
TraesCS4B01G246100.1 nucleus
TraesCS4D01G245500.2 nucleus
TraesCS5A01G142400.1 nucleus
TraesCS5B01G141100.1 nucleus
TraesCS5D01G149700.1 nucleus
TraesCS6A01G089500.2
TraesCS6B01G111900.1
TraesCSU01G016800.1
TraesCSU01G188700.1 nucleus

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G51600.1 TraesCS2A01G196600.1 AT2G22640.1 25262777
AT5G51600.1 TraesCS2B01G224200.1 AT2G22640.1 25262777
AT5G51600.1 TraesCS2D01G204600.1 AT2G22640.1 25262777
AT5G51600.1 TraesCS2A01G194000.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS2B01G212800.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS2D01G193800.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4A01G058600.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4B01G246100.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4D01G245500.2 AT3G19590.1 25262777
AT5G51600.1 TraesCS2A01G194000.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS2B01G212800.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS2D01G193800.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4A01G058600.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4B01G246100.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4D01G245500.2 AT3G19590.1 25262777
AT5G51600.1 TraesCS2A01G320000.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2B01G363300.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2D01G343300.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2A01G320000.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2B01G363300.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2D01G343300.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS5A01G142400.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5B01G141100.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5D01G149700.1 AT5G05510.1 25262777
AT5G51600.1 TraesCSU01G188700.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5A01G142400.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5B01G141100.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5D01G149700.1 AT5G05510.1 25262777
AT5G51600.1 TraesCSU01G188700.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS1A01G378900.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS1B01G400200.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS1D01G386100.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS3A01G264600.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS3B01G297900.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS3D01G264700.2 AT5G51600.1 25262777
AT5G51600.1 TraesCS6A01G089500.2 AT5G51600.1 25262777
AT5G51600.1 TraesCS6B01G111900.1 AT5G51600.1 25262777
AT5G51600.1 TraesCSU01G016800.1 AT5G51600.1 25262777
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G386100.1 Wheat cytosol 97.36 97.36
TraesCS1A01G378900.1 Wheat cytosol 96.04 96.6
HORVU1Hr1G083810.7 Barley cytosol 90.9 90.5
TraesCS3B01G297900.1 Wheat cytosol 68.72 67.83
Os05t0552900-01 Rice cytosol 71.66 66.76
GSMUA_Achr5P11340_001 Banana cytosol 61.53 62.82
GSMUA_Achr1P02510_001 Banana cytosol 61.97 62.52
VIT_16s0022g01820.t01 Wine grape nucleus 58.59 54.66
VIT_15s0048g00860.t01 Wine grape cytosol, nucleus, plasma membrane 45.52 51.75
KRG92454 Soybean nucleus 55.07 51.58
PGSC0003DMT400070431 Potato nucleus 52.28 51.3
KRH38719 Soybean cytosol 48.46 51.24
KRH34346 Soybean cytosol 55.95 51.14
Solyc03g007130.2.1 Tomato nucleus 55.36 50.88
PGSC0003DMT400079660 Potato cytosol 55.21 50.47
Bra023930.1-P Field mustard cytosol 52.42 50.35
Bra028266.1-P Field mustard cytosol 52.13 50.21
AT5G51600.1 Thale cress cytosol 51.69 49.79
Solyc11g072280.1.1 Tomato extracellular 55.36 48.9
CDY00270 Canola nucleus 37.89 47.87
CDX86911 Canola nucleus 37.89 47.87
CDX87240 Canola nucleus 37.89 47.69
Bra010069.1-P Field mustard nucleus 37.74 47.68
Bra035900.1-P Field mustard nucleus 37.59 47.32
CDY16786 Canola nucleus 37.59 47.15
TraesCS7B01G304900.2 Wheat cytosol 39.5 46.38
AT5G62250.1 Thale cress nucleus 37.3 46.27
Solyc01g091380.2.1 Tomato plastid 47.58 43.55
TraesCS6B01G111900.1 Wheat nucleus 35.1 43.53
PGSC0003DMT400033224 Potato nucleus 48.02 43.31
KRH40591 Soybean nucleus 42.88 41.65
AT3G60840.1 Thale cress cytosol 40.97 41.21
TraesCS7B01G190000.1 Wheat endoplasmic reticulum, golgi 37.0 40.98
CDX89081 Canola cytosol 40.97 40.67
Bra014467.1-P Field mustard cytosol 38.47 40.43
TraesCS1B01G267200.2 Wheat cytosol 34.07 40.28
CDY62713 Canola cytosol 40.38 40.2
TraesCS6B01G311200.1 Wheat cytosol 34.8 40.1
KRH09228 Soybean cytosol 31.42 40.0
TraesCS4B01G230500.2 Wheat nucleus 35.68 39.77
TraesCS5B01G232400.1 Wheat nucleus 33.92 39.22
TraesCS4B01G051200.1 Wheat nucleus 30.98 34.14
TraesCS7B01G158100.1 Wheat cytosol, mitochondrion, nucleus 28.63 33.05
Protein Annotations
EnsemblPlants:TraesCS1B01G400200.1EnsemblPlantsGene:TraesCS1B01G400200Gene3D:1.20.58.1520GO:GO:0000226GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016043InterPro:MAP65_Ase1_PRC1
ncoils:CoilPANTHER:PTHR19321PANTHER:PTHR19321:SF8PFAM:PF03999SEG:segMapMan:13.4.3.5
Description
No Description!
Coordinates
chr1B:-:630822733..630826322
Molecular Weight (calculated)
76452.5 Da
IEP (calculated)
6.449
GRAVY (calculated)
-0.543
Length
681 amino acids
Sequence
(BLAST)
001: MSGGGQLLQM ETACGALMRE LQVIWDEIGE QGAARDTMLL ELQQECLDAY RRKVDQASRC RAQLRQAIAD AQAELAALCS AMAESPALVR QKGCGLREEL
101: SAIVPYLEEM KKRKVERWNQ ILDVIGKIKK ISSEIRPADF VPFKAPVDQS DLSCRRLEEL RMELQSLEKE KSERLKQVMD YLNTLHSLCK VLSVDFKQTI
201: SDVHPSLDED GVPMNISNTT IERLALAIQR LRETKIERMQ KLQDLSSTML ELWNLMDTPI EEQQSFQNIT CNIAASEPEI TEANALSIDV INFVEAEVLR
301: LEQLKVSKMK DLVLKKQTEL EEHRRRAHLV GDEHYATQFN VEAIEAGAID PSLLLEQIEA YIATVKEDAF SRKDILERVE RWLNACEEEA WLEDYSKDDN
401: RYNAGRGVHI MLKRAEKARV LVNKIPGIVD VLTNKVLAWE KERGTEFTYD GVSLLSMLDD YRIVREEKEQ EKKRQRDQKK LEDQFKAEQE MLYGSKPSPS
501: SRSNSGKKVT RNSSAGTNRR LSVGGGPVRT PKSLTPQSRS VRSAKKTEDS GTLSPGNRGK GTASPPIKKL SFKASTLGET ETPRKPFTQI TPGNSIQSTP
601: VRSAPSGTEG ENRTPKILAA PTPRTPMTVT SPMQMATTPA LTAAWAAPVC VSNDKPELCL LESTEYSFEE RRLAYLAAHA A
Best Arabidopsis Sequence Match ( AT3G60840.1 )
(BLAST)
001: MIRNSTEQFS RIETTCGLLL RQLQEIWNEM GETEDEKDAS LADIEKECLS VYKRKVEEAS RGKANLLKEI AVGRAEIAAI GSSMGGQEIH SNSRLGENLK
101: EELENVNVQL DGLRKRKAER MIRFNEVIDQ LLKLSLQLGN PTDYLKKFAA EETDLSLQRL EELRSQLGEL QNEKSKRLEE VECLLKTLNS LCSVLGEDFK
201: GMIRGIHSSL VDSNTRDVSR STLDKLDMMI VNLREAKLQR MQKVQDLAVS LLELWNLLDT PAEEQKIFHN VTCSIALTES EITEANILSV ASIKRVEDEV
301: IRLSKIKITK IKEVILRKRL ELEEISRKMH MATEVLKSEN FSVEAIESGV KDPEQLLEQI DSEIAKVKEE ASSRKEILEK VEKWMSACEE ESWLEEYNRD
401: DNRYNAGRGA HLTLKRAEKA RLLVNKLPGM VEALTAKVTA WENERGNEFL YDGVRVLSML GQYKTVWEEK EHEKQRQRDM KKLHGQLITE QEALYGSKPS
501: PNKSGKKPLR TPVNAAMNRK LSLGGAMLHQ SLKHEKATLN SKRTKYYDQN ATSRRDSALP TLSGRRNSEL PGRIRSKNVP VAGKAARSPM LRKPLSPVTS
601: NILNSPEDHH KDAYTTKERI LTPKTNEEKK RAVPTTPAAS VAMTEATTPF TPAVEKRMDE EDVIVEYSFE EVRAGFC
Arabidopsis Description
MAP65-465-kDa microtubule-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZY0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.