Factsheet for TraesCS3A01G264600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G378900.1
TraesCS1B01G400200.1
TraesCS1D01G386100.1
TraesCS2A01G194000.1	nucleus
TraesCS2A01G196600.1
TraesCS2A01G320000.1	nucleus
TraesCS2B01G212800.1	nucleus
TraesCS2B01G224200.1
TraesCS2B01G363300.1	nucleus
TraesCS2D01G193800.1	nucleus
TraesCS2D01G204600.1
TraesCS2D01G343300.1	nucleus
TraesCS3A01G264600.1
TraesCS3B01G297900.1
TraesCS3D01G264700.2
TraesCS4A01G058600.1	nucleus
TraesCS4B01G246100.1	nucleus
TraesCS4D01G245500.2	nucleus
TraesCS5A01G142400.1	nucleus
TraesCS5B01G141100.1	nucleus
TraesCS5D01G149700.1	nucleus
TraesCS6A01G089500.2
TraesCS6B01G111900.1
TraesCSU01G016800.1
TraesCSU01G188700.1	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51600.1	TraesCS2A01G196600.1	AT2G22640.1	25262777
AT5G51600.1	TraesCS2B01G224200.1	AT2G22640.1	25262777
AT5G51600.1	TraesCS2D01G204600.1	AT2G22640.1	25262777
AT5G51600.1	TraesCS2A01G194000.1	AT3G19590.1	25262777
AT5G51600.1	TraesCS2B01G212800.1	AT3G19590.1	25262777
AT5G51600.1	TraesCS2D01G193800.1	AT3G19590.1	25262777
AT5G51600.1	TraesCS4A01G058600.1	AT3G19590.1	25262777
AT5G51600.1	TraesCS4B01G246100.1	AT3G19590.1	25262777
AT5G51600.1	TraesCS4D01G245500.2	AT3G19590.1	25262777
AT5G51600.1	TraesCS2A01G194000.1	AT3G19590.1	25262777
AT5G51600.1	TraesCS2B01G212800.1	AT3G19590.1	25262777
AT5G51600.1	TraesCS2D01G193800.1	AT3G19590.1	25262777
AT5G51600.1	TraesCS4A01G058600.1	AT3G19590.1	25262777
AT5G51600.1	TraesCS4B01G246100.1	AT3G19590.1	25262777
AT5G51600.1	TraesCS4D01G245500.2	AT3G19590.1	25262777
AT5G51600.1	TraesCS2A01G320000.1	AT3G25980.1	25262777
AT5G51600.1	TraesCS2B01G363300.1	AT3G25980.1	25262777
AT5G51600.1	TraesCS2D01G343300.1	AT3G25980.1	25262777
AT5G51600.1	TraesCS2A01G320000.1	AT3G25980.1	25262777
AT5G51600.1	TraesCS2B01G363300.1	AT3G25980.1	25262777
AT5G51600.1	TraesCS2D01G343300.1	AT3G25980.1	25262777
AT5G51600.1	TraesCS5A01G142400.1	AT5G05510.1	25262777
AT5G51600.1	TraesCS5B01G141100.1	AT5G05510.1	25262777
AT5G51600.1	TraesCS5D01G149700.1	AT5G05510.1	25262777
AT5G51600.1	TraesCSU01G188700.1	AT5G05510.1	25262777
AT5G51600.1	TraesCS5A01G142400.1	AT5G05510.1	25262777
AT5G51600.1	TraesCS5B01G141100.1	AT5G05510.1	25262777
AT5G51600.1	TraesCS5D01G149700.1	AT5G05510.1	25262777
AT5G51600.1	TraesCSU01G188700.1	AT5G05510.1	25262777
AT5G51600.1	TraesCS1A01G378900.1	AT5G51600.1	25262777
AT5G51600.1	TraesCS1B01G400200.1	AT5G51600.1	25262777
AT5G51600.1	TraesCS1D01G386100.1	AT5G51600.1	25262777
AT5G51600.1	TraesCS3A01G264600.1	AT5G51600.1	25262777
AT5G51600.1	TraesCS3B01G297900.1	AT5G51600.1	25262777
AT5G51600.1	TraesCS3D01G264700.2	AT5G51600.1	25262777
AT5G51600.1	TraesCS6A01G089500.2	AT5G51600.1	25262777
AT5G51600.1	TraesCS6B01G111900.1	AT5G51600.1	25262777
AT5G51600.1	TraesCSU01G016800.1	AT5G51600.1	25262777

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G264700.2	Wheat	cytosol	99.27	99.13
TraesCS3B01G297900.1	Wheat	cytosol	99.13	98.99
HORVU3Hr1G063620.1	Barley	plastid	96.66	89.28
Zm00001d030420_P001	Maize	cytosol	27.14	81.66
Zm00001d011615_P001	Maize	cytosol, nucleus, plastid	81.71	79.86
OQU87349	Sorghum	golgi, vacuole	81.71	78.74
Zm00001d043831_P001	Maize	cytosol, mitochondrion	81.13	76.16
TraesCS1A01G378900.1	Wheat	cytosol	69.09	70.31
GSMUA_Achr5P11340_001	Banana	cytosol	64.59	66.72
GSMUA_Achr1P02510_001	Banana	cytosol	65.31	66.67
Zm00001d006888_P001	Maize	cytosol	23.08	59.55
VIT_16s0022g01820.t01	Wine grape	nucleus	62.99	59.45
KRG92454	Soybean	nucleus	58.78	55.71
Solyc03g007130.2.1	Tomato	nucleus	59.8	55.6
VIT_15s0048g00860.t01	Wine grape	cytosol, nucleus, plasma membrane	48.19	55.43
PGSC0003DMT400079660	Potato	cytosol	59.8	55.3
KRH34346	Soybean	cytosol	59.36	54.9
KRH38719	Soybean	cytosol	50.94	54.5
PGSC0003DMT400070431	Potato	nucleus	54.86	54.47
Bra023930.1-P	Field mustard	cytosol	55.88	54.3
AT5G51600.1	Thale cress	cytosol	55.44	54.03
Bra028266.1-P	Field mustard	cytosol	55.3	53.89
CDX86911	Canola	nucleus	41.65	53.25
CDY00270	Canola	nucleus	41.51	53.06
Bra010069.1-P	Field mustard	nucleus	41.36	52.88
Bra035900.1-P	Field mustard	nucleus	40.93	52.13
CDX87240	Canola	nucleus	40.78	51.94
CDY16786	Canola	nucleus	40.93	51.93
AT5G62250.1	Thale cress	nucleus	41.07	51.55
Solyc11g072280.1.1	Tomato	extracellular	56.89	50.84
TraesCS7A01G405500.1	Wheat	cytosol	39.19	46.55
Solyc01g091380.2.1	Tomato	plastid	47.75	44.22
TraesCS6A01G089500.2	Wheat	nucleus	35.12	44.16
PGSC0003DMT400033224	Potato	nucleus	47.9	43.71
KRH09228	Soybean	cytosol	33.67	43.36
KRH40591	Soybean	nucleus	43.4	42.65
Bra014467.1-P	Field mustard	cytosol	39.62	42.13
CDX89081	Canola	cytosol	41.8	41.98
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	35.99	41.82
AT3G60840.1	Thale cress	cytosol	41.07	41.8
CDY62713	Canola	cytosol	41.22	41.52
Zm00001d046884_P001	Maize	plastid	28.3	40.62
TraesCS6A01G282800.1	Wheat	cytosol	34.54	40.55
TraesCS5A01G233900.1	Wheat	nucleus	34.11	40.1
TraesCS4A01G074200.2	Wheat	nucleus	35.41	39.93
TraesCS1A01G256800.1	Wheat	nucleus	32.95	39.41
TraesCS7A01G260100.2	Wheat	nucleus	29.9	34.92
TraesCS4A01G263800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.19	33.55

Protein Annotations

EnsemblPlants:TraesCS3A01G264600.1	EnsemblPlantsGene:TraesCS3A01G264600	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1
ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF8	PFAM:PF03999	SEG:seg	MapMan:13.4.3.5

Description

No Description!

Coordinates

chr3A:-:488308067..488311817

Molecular Weight (calculated)

78382.8 Da

IEP (calculated)

5.915

GRAVY (calculated)

-0.597

Length

689 amino acids

Sequence
(BLAST)

001: MGGAVRDQQQ QLHPCDSLLL ELNVIWDEVG EPDTVRDKTL LELEQECLDV YRRKVDQANR CRAQLRQSIA EAEAELAGIC SAIGEPPVHV RQSNQKLHGL
101: REELNAIIPY LEEMRTKKVE RWSQFVHVLE EIKKISSEIR PSDFVPFKTP VDQSDLSLRK FEELTKELES LQKEKRERLK QVMDHLNTLH SLCEVLGIDF
201: KQTVHEVHPS LDEAEGSKNL SNTTIERLAL AVDRLREIKI QRMQKLQDFA STMLELWNLM DTPIEEQQMF QNVTCNIAAS EHEITEPNTL SIDFLSYVEA
301: EVLRLEQLKG SKMKDLVLKK KSELEEHRRR AHLIGEEGYS DEFNIEAIES GAIDPALVLE QIEAHIATVK DEAFSRKDIL EKVERFLNAC EEEAWLEDYN
401: KDDNRYNAGK GAHLTLKRAE KARILVNKIP GMVDVLTTKI IAWENERGKE FTYDGVRLLS MLDEYMIVRQ EKEQEKKRQR DQKKLHDQLK AEQEALYGSK
501: PSPSKPQSIK KAPRHSMGGV NRRVSMGGAT MQAPKTDILH SKNVRAAKRT EDIAHLSPAS RGLDIGDLPI KKLSFNATAL RETETPRKPF AQIMPPPSSV
601: PSTPARSVTN DTEDENRTPN PKTFGAALNL KTPMTVAAPM QLAMTPAVAS KVTAAPVSLV YEKPEPTLPE AIEYSFEERR LAVYLSREV

Best Arabidopsis Sequence Match ( AT5G51600.1 )
(BLAST)

001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV

Arabidopsis Description

MAP65-365-kDa microtubule-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.