Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Solyc01g107160.2.1 | nucleus |
Solyc03g007130.2.1 | |
Solyc03g043720.2.1 | |
Solyc05g014370.2.1 | nucleus |
Solyc06g051040.2.1 | nucleus |
Solyc11g072280.1.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400079660 | Potato | cytosol | 96.49 | 95.97 |
VIT_16s0022g01820.t01 | Wine grape | nucleus | 70.58 | 71.64 |
Solyc11g072280.1.1 | Tomato | extracellular | 73.01 | 70.17 |
KRG92454 | Soybean | nucleus | 63.56 | 64.79 |
KRH34346 | Soybean | cytosol | 64.24 | 63.89 |
GSMUA_Achr1P02510_001 | Banana | cytosol | 57.76 | 63.41 |
KRH38719 | Soybean | cytosol | 55.06 | 63.35 |
GSMUA_Achr5P11340_001 | Banana | cytosol | 56.95 | 63.27 |
Bra028266.1-P | Field mustard | cytosol | 60.05 | 62.94 |
Bra023930.1-P | Field mustard | cytosol | 60.19 | 62.91 |
AT5G51600.1 | Thale cress | cytosol | 58.97 | 61.81 |
TraesCS3A01G264600.1 | Wheat | cytosol | 55.6 | 59.8 |
TraesCS3B01G297900.1 | Wheat | cytosol | 55.6 | 59.71 |
TraesCS3D01G264700.2 | Wheat | cytosol | 55.6 | 59.71 |
GSMUA_Achr5P10040_001 | Banana | nucleus | 51.01 | 59.62 |
Zm00001d011615_P001 | Maize | cytosol, nucleus, plastid | 56.41 | 59.29 |
OQU87349 | Sorghum | golgi, vacuole | 56.55 | 58.6 |
CDY00270 | Canola | nucleus | 42.11 | 57.88 |
Zm00001d030420_P001 | Maize | cytosol | 17.81 | 57.64 |
Bra010069.1-P | Field mustard | nucleus | 41.84 | 57.51 |
Zm00001d043831_P001 | Maize | cytosol, mitochondrion | 56.01 | 56.54 |
CDX86911 | Canola | nucleus | 40.76 | 56.03 |
CDX87240 | Canola | nucleus | 40.89 | 56.01 |
AT5G62250.1 | Thale cress | nucleus | 41.16 | 55.56 |
TraesCS1B01G400200.1 | Wheat | cytosol | 50.88 | 55.36 |
TraesCS1D01G386100.1 | Wheat | cytosol | 50.88 | 55.36 |
TraesCS1A01G378900.1 | Wheat | cytosol | 50.47 | 55.24 |
Bra035900.1-P | Field mustard | nucleus | 40.22 | 55.08 |
CDY16786 | Canola | nucleus | 40.22 | 54.88 |
HORVU3Hr1G063620.1 | Barley | plastid | 54.93 | 54.56 |
HORVU1Hr1G083810.7 | Barley | cytosol | 49.93 | 54.09 |
Os05t0552900-01 | Rice | cytosol | 53.17 | 53.9 |
KRH09228 | Soybean | cytosol | 36.57 | 50.65 |
Solyc07g064970.2.1 | Tomato | nucleus | 38.87 | 49.57 |
Solyc01g091380.2.1 | Tomato | plastid | 49.53 | 49.33 |
Os02t0126300-01 | Rice | plasma membrane | 36.44 | 48.3 |
Solyc12g014490.1.1 | Tomato | cytosol | 36.03 | 47.09 |
EES06214 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.76 | 45.3 |
TraesCS6A01G089500.2 | Wheat | nucleus | 32.39 | 43.8 |
Zm00001d053956_P001 | Maize | nucleus | 34.95 | 43.46 |
TraesCSU01G016800.1 | Wheat | nucleus | 32.25 | 43.45 |
Zm00001d006888_P001 | Maize | cytosol | 15.65 | 43.45 |
Solyc04g008290.2.1 | Tomato | nucleus | 34.82 | 43.0 |
TraesCS6B01G111900.1 | Wheat | nucleus | 31.85 | 42.99 |
Zm00001d015096_P002 | Maize | nucleus | 35.22 | 42.72 |
Solyc01g005080.2.1 | Tomato | cytosol | 31.98 | 42.4 |
Solyc05g015320.2.1 | Tomato | extracellular | 33.87 | 42.18 |
Solyc01g096680.2.1 | Tomato | nucleus | 32.39 | 42.18 |
Zm00001d046884_P001 | Maize | plastid | 21.32 | 32.92 |
Protein Annotations
EnsemblPlants:Solyc03g007130.2.1 | EnsemblPlantsGene:Solyc03g007130.2 | Gene3D:1.20.58.1520 | GO:GO:0000226 | GO:GO:0000910 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007049 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
GO:GO:0016043 | InterPro:MAP65_Ase1_PRC1 | ncoils:Coil | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF7 | PFAM:PF03999 |
SEG:seg | UniParc:UPI0002767F63 | UniProt:K4BED6 | MapMan:13.4.3.5 | : | : |
Description
No Description!
Coordinates
chr3:+:1721232..1725024
Molecular Weight (calculated)
83853.2 Da
IEP (calculated)
5.764
GRAVY (calculated)
-0.601
Length
741 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAAQGDPVQ QMETTCGTLL YELQIIWDEV GESDTERDKM LYELERECLE VYRRKVDQAN KSRAQLRQAI ADAEAELAAI CSAMGERPVH IRQSDQSLGG
101: LKAELRTILP ELEEMHNRKS DRKNQFIEVT KQLQKIRDEI FKPTGCTSTA VVIDESDLSL RKLEELHAEL QALQKEKSER LKQVLDHLST LNSLCLVLGM
201: DFKSTVNEVH PSLGESEGTK NISNDTIQHL AAAIGRLREV KLLRMKRLQE LASSMLELWN LMDTPIEEQQ TFQNVTCKIA ASEHEITEPN ILSVEFINYV
301: EGELSRLEEL KASKMKELVL KKRSELEEIC RKTHMVADSD NAMDVAIEAI ESGAVDAASI LEQIELQVAQ VKEEAFSRKE ILDKVEKWIA ACEEECWLEE
401: YNRDENRYNA GRGAHLTLKR AEKARTLVNK LPVMVEALAS KTKAWENERG IDFTYDGIRL LAMLEEYNIL RQEKEEERKR QRDQKKLQGQ LMAEHEAMYG
501: SKPSPMKNQS AKKGRRMSCS GATNRRLSVG GTMLQTPKLS IGGTMPQTPK TEFHSTKATP NTHNTKKSDL FQFNYSNDDG LPALSSGRKG LDLAGLPLKK
601: QSNTVNGCEL EKTMTRKPFS PISSTDSSKF NATNILEDQN RKHNQNEMAN KMLPSSQIPF STPVKTLYTT EEENRTPLTV PIIPVPSTPL TVSAPMQTAI
701: TPVHNALVPY NYSKPVEEIP VEIEYSFEER RLGFVLPRTQ V
101: LKAELRTILP ELEEMHNRKS DRKNQFIEVT KQLQKIRDEI FKPTGCTSTA VVIDESDLSL RKLEELHAEL QALQKEKSER LKQVLDHLST LNSLCLVLGM
201: DFKSTVNEVH PSLGESEGTK NISNDTIQHL AAAIGRLREV KLLRMKRLQE LASSMLELWN LMDTPIEEQQ TFQNVTCKIA ASEHEITEPN ILSVEFINYV
301: EGELSRLEEL KASKMKELVL KKRSELEEIC RKTHMVADSD NAMDVAIEAI ESGAVDAASI LEQIELQVAQ VKEEAFSRKE ILDKVEKWIA ACEEECWLEE
401: YNRDENRYNA GRGAHLTLKR AEKARTLVNK LPVMVEALAS KTKAWENERG IDFTYDGIRL LAMLEEYNIL RQEKEEERKR QRDQKKLQGQ LMAEHEAMYG
501: SKPSPMKNQS AKKGRRMSCS GATNRRLSVG GTMLQTPKLS IGGTMPQTPK TEFHSTKATP NTHNTKKSDL FQFNYSNDDG LPALSSGRKG LDLAGLPLKK
601: QSNTVNGCEL EKTMTRKPFS PISSTDSSKF NATNILEDQN RKHNQNEMAN KMLPSSQIPF STPVKTLYTT EEENRTPLTV PIIPVPSTPL TVSAPMQTAI
701: TPVHNALVPY NYSKPVEEIP VEIEYSFEER RLGFVLPRTQ V
001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV
Arabidopsis Description
MAP65-365-kDa microtubule-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.