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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400079660 Potato cytosol 96.49 95.97
VIT_16s0022g01820.t01 Wine grape nucleus 70.58 71.64
Solyc11g072280.1.1 Tomato extracellular 73.01 70.17
KRG92454 Soybean nucleus 63.56 64.79
KRH34346 Soybean cytosol 64.24 63.89
GSMUA_Achr1P02510_001 Banana cytosol 57.76 63.41
KRH38719 Soybean cytosol 55.06 63.35
GSMUA_Achr5P11340_001 Banana cytosol 56.95 63.27
Bra028266.1-P Field mustard cytosol 60.05 62.94
Bra023930.1-P Field mustard cytosol 60.19 62.91
AT5G51600.1 Thale cress cytosol 58.97 61.81
TraesCS3A01G264600.1 Wheat cytosol 55.6 59.8
TraesCS3B01G297900.1 Wheat cytosol 55.6 59.71
TraesCS3D01G264700.2 Wheat cytosol 55.6 59.71
GSMUA_Achr5P10040_001 Banana nucleus 51.01 59.62
Zm00001d011615_P001 Maize cytosol, nucleus, plastid 56.41 59.29
OQU87349 Sorghum golgi, vacuole 56.55 58.6
CDY00270 Canola nucleus 42.11 57.88
Zm00001d030420_P001 Maize cytosol 17.81 57.64
Bra010069.1-P Field mustard nucleus 41.84 57.51
Zm00001d043831_P001 Maize cytosol, mitochondrion 56.01 56.54
CDX86911 Canola nucleus 40.76 56.03
CDX87240 Canola nucleus 40.89 56.01
AT5G62250.1 Thale cress nucleus 41.16 55.56
TraesCS1B01G400200.1 Wheat cytosol 50.88 55.36
TraesCS1D01G386100.1 Wheat cytosol 50.88 55.36
TraesCS1A01G378900.1 Wheat cytosol 50.47 55.24
Bra035900.1-P Field mustard nucleus 40.22 55.08
CDY16786 Canola nucleus 40.22 54.88
HORVU3Hr1G063620.1 Barley plastid 54.93 54.56
HORVU1Hr1G083810.7 Barley cytosol 49.93 54.09
Os05t0552900-01 Rice cytosol 53.17 53.9
KRH09228 Soybean cytosol 36.57 50.65
Solyc07g064970.2.1 Tomato nucleus 38.87 49.57
Solyc01g091380.2.1 Tomato plastid 49.53 49.33
Os02t0126300-01 Rice plasma membrane 36.44 48.3
Solyc12g014490.1.1 Tomato cytosol 36.03 47.09
EES06214 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 35.76 45.3
TraesCS6A01G089500.2 Wheat nucleus 32.39 43.8
Zm00001d053956_P001 Maize nucleus 34.95 43.46
TraesCSU01G016800.1 Wheat nucleus 32.25 43.45
Zm00001d006888_P001 Maize cytosol 15.65 43.45
Solyc04g008290.2.1 Tomato nucleus 34.82 43.0
TraesCS6B01G111900.1 Wheat nucleus 31.85 42.99
Zm00001d015096_P002 Maize nucleus 35.22 42.72
Solyc01g005080.2.1 Tomato cytosol 31.98 42.4
Solyc05g015320.2.1 Tomato extracellular 33.87 42.18
Solyc01g096680.2.1 Tomato nucleus 32.39 42.18
Zm00001d046884_P001 Maize plastid 21.32 32.92
Protein Annotations
EnsemblPlants:Solyc03g007130.2.1EnsemblPlantsGene:Solyc03g007130.2Gene3D:1.20.58.1520GO:GO:0000226GO:GO:0000910GO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0007049GO:GO:0008017GO:GO:0008150GO:GO:0009987
GO:GO:0016043InterPro:MAP65_Ase1_PRC1ncoils:CoilPANTHER:PTHR19321PANTHER:PTHR19321:SF7PFAM:PF03999
SEG:segUniParc:UPI0002767F63UniProt:K4BED6MapMan:13.4.3.5::
Description
No Description!
Coordinates
chr3:+:1721232..1725024
Molecular Weight (calculated)
83853.2 Da
IEP (calculated)
5.764
GRAVY (calculated)
-0.601
Length
741 amino acids
Sequence
(BLAST)
001: MTAAQGDPVQ QMETTCGTLL YELQIIWDEV GESDTERDKM LYELERECLE VYRRKVDQAN KSRAQLRQAI ADAEAELAAI CSAMGERPVH IRQSDQSLGG
101: LKAELRTILP ELEEMHNRKS DRKNQFIEVT KQLQKIRDEI FKPTGCTSTA VVIDESDLSL RKLEELHAEL QALQKEKSER LKQVLDHLST LNSLCLVLGM
201: DFKSTVNEVH PSLGESEGTK NISNDTIQHL AAAIGRLREV KLLRMKRLQE LASSMLELWN LMDTPIEEQQ TFQNVTCKIA ASEHEITEPN ILSVEFINYV
301: EGELSRLEEL KASKMKELVL KKRSELEEIC RKTHMVADSD NAMDVAIEAI ESGAVDAASI LEQIELQVAQ VKEEAFSRKE ILDKVEKWIA ACEEECWLEE
401: YNRDENRYNA GRGAHLTLKR AEKARTLVNK LPVMVEALAS KTKAWENERG IDFTYDGIRL LAMLEEYNIL RQEKEEERKR QRDQKKLQGQ LMAEHEAMYG
501: SKPSPMKNQS AKKGRRMSCS GATNRRLSVG GTMLQTPKLS IGGTMPQTPK TEFHSTKATP NTHNTKKSDL FQFNYSNDDG LPALSSGRKG LDLAGLPLKK
601: QSNTVNGCEL EKTMTRKPFS PISSTDSSKF NATNILEDQN RKHNQNEMAN KMLPSSQIPF STPVKTLYTT EEENRTPLTV PIIPVPSTPL TVSAPMQTAI
701: TPVHNALVPY NYSKPVEEIP VEIEYSFEER RLGFVLPRTQ V
Best Arabidopsis Sequence Match ( AT5G51600.1 )
(BLAST)
001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV
Arabidopsis Description
MAP65-365-kDa microtubule-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.