Factsheet for Solyc05g015320.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074853	Potato	cytosol	97.48	97.48
VIT_01s0010g03540.t01	Wine grape	cytosol	70.92	74.43
KRG97427	Soybean	cytosol	63.19	68.24
KRH31473	Soybean	cytosol	66.55	66.67
AT1G27920.1	Thale cress	nucleus	59.66	63.17
CDX84899	Canola	extracellular, nucleus, plastid	59.16	61.32
CDY27637	Canola	cytosol	58.49	61.05
GSMUA_Achr11P...	Banana	nucleus	55.8	57.74
Os08t0531100-01	Rice	cytosol	46.22	56.35
Bra032853.1-P	Field mustard	cytosol	56.97	56.13
EES15312	Sorghum	cytosol	52.94	53.3
Zm00001d031619_P001	Maize	nucleus	52.6	52.96
TraesCS7D01G261100.1	Wheat	nucleus	51.6	52.03
TraesCS7B01G158100.1	Wheat	cytosol, mitochondrion, nucleus	51.6	52.03
TraesCS7A01G260100.2	Wheat	nucleus	51.43	51.86
Solyc07g064970.2.1	Tomato	nucleus	47.56	48.71
Solyc12g014490.1.1	Tomato	cytosol	45.04	47.27
HORVU7Hr1G054130.4	Barley	mitochondrion	50.92	45.56
Zm00001d049816_P001	Maize	nucleus	19.33	42.12
Solyc01g096680.2.1	Tomato	nucleus	40.0	41.83
Solyc01g005080.2.1	Tomato	cytosol	35.29	37.57
Solyc04g008290.2.1	Tomato	nucleus	36.97	36.67
Solyc03g007130.2.1	Tomato	nucleus	42.18	33.87
Solyc01g091380.2.1	Tomato	plastid	40.5	32.39
Solyc11g072280.1.1	Tomato	extracellular	41.68	32.17

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	ncoils:Coil	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005819	GO:GO:0005856	GO:GO:0005874	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009524	GO:GO:0009987	GO:GO:0016043	UniProt:K4BYP8	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999
PANTHER:PTHR19321	PANTHER:PTHR19321:SF3	EnsemblPlantsGene:Solyc05g015320.2	EnsemblPlants:Solyc05g015320.2.1	UniParc:UPI0002766A7C	SEG:seg

Description

65-kDa microtubule-associated protein 8 [Source:Projected from Arabidopsis thaliana (AT1G27920) UniProtKB/Swiss-Prot;Acc:Q9C7G0]

Coordinates

chr5:+:10356231..10361325

Molecular Weight (calculated)

67984.4 Da

IEP (calculated)

6.875

GRAVY (calculated)

-0.625

Length

595 amino acids

Sequence
(BLAST)

001: MGSVQTPIGI RSSALLETSC GYLLQELQMI WDEVGDDQFE REKVLLDIEQ ECLDVYRKKV DNANISRAQL HQELADSEAE FTHLLLLLDE RSLPGRPEKM
101: TGTLKEQLES IAPALREMRI RKEERVKQFR AVQGQIQKIS AEIAGESEYN DLSSNVLVNG NDLSLKKLEE HQNELQRLQN EKIERLQKVE SYISMIRSLA
201: AMLGTDSSLI ITKVHPSLNE LSGLSKNISD SILDKLGSTV RSLEADKKAR LEKLHQLGKA LTNLWNLMDT PQKDRARFSN VTALISLSSK DISTPGSLTL
301: DIIQQAETEV RRLDQLKASK MKELFLRKQI DLEEICKRSH MEIPSQLEME SILKLMNSGE IDHADLLTSM NKQITQAQEE ASSRKAIMEK VEKWILARDE
401: ELWLEEYSRD DNRYSVSRGA HKNLRRAERA RVMVNKIPAL VDMLMAKTKS WEEERNKPFL YDEVPLFAML EEYNLLRKER DEEKQRQREL KKVQNQVPVG
501: QENLFVLRPS SSSKRLSDRS LNGGFNNATP VNKKSSLGIQ QLGPTPINTP QQSISFLKES KKEDHRKILS RSRFAFHPGD DSTSVVSSFS GPFSP

Best Arabidopsis Sequence Match ( AT1G27920.1 )
(BLAST)

001: MGSLQTPIEM RSSSLLDTSC GYLLRELQMI WDEVGEDKFE REKVLLDIEQ ECVEAYRRKV DHANVSRSRL HQELAESEAE LTHFLLCLGE RSVPGRPEKK
101: GGTLREQLDS IAPALREMRL RKDERVKQFR SVKGEIQKIS AEIAGRSTYE DSTRKITIDD NDLSNKKLEE YQNELHRLHD EKNERLQKVD IYICAIRDLS
201: ATLGTEASMI ITKIHPSLND LYGISKNISD DILKKLNGTV VSLEEEKHKR LEKLHHLGRA LSNLWNLMDA SYEDRQKFFH VIDLLSSAPS DVCAPGSITL
301: DIIQQAEAEV KRLDQLKASR IKELFIKKQK ELEDTCNMSH METPSTEMGN ITNLVDSGEV DHVDLLAAMD EKIARAKEEA ASRKGIIEKV DRWMLASDEE
401: RWLEEYDQDE NRYSVSRNAH RNLRRAERAR ITVSKISGLV ESILVKAKSW EVERQKVFLY NEVPLVAMLQ EYNKLRQEKE MEKQRLREMK KMSIPQPVAE
501: GDNFYMARPA SSNRRISNRS MNGGFGSGSP INRKYSGGFN NTNNNYTALG TSIRRESRKS EA

Arabidopsis Description

MAP65-865-kDa microtubule-associated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7G0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.